Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1985 ATGGCTGAGGAGTTTCAAGCTAGGATTTGTGGTGAAAACTGGTGGAGTAGTACTACTACTATTGATTCAACAAGAACTGTGTTGTTCCCTCTAAGTTCTTCATCATCGTCATCGTCATCTATTTCTTCTCCTTGTTCCGTGGCAGCTGTTAATAATGATGCAGGAAACTATAATTTGAAGGCAACAAAGTTTTGTGCTGAAACTGAAGAGACTAACAACACTTACCTGGGTTTTGTTGATGATATTGCACAGAAGCCACATAATAAGAGTGAATTATTATCATCATCAGCATCAGCCAGTGGAAGCAGCAGTGGTGGCATGTTGATCGATTCCACCTTACAGATGATGGGTTTTGGCCTCACATCTTCAACAGCATCAGAGAATTGGAATCAGCCTCTATTATTTCGTTGTAATGGAAGGGCAGCAGAGAGCAATTTCCACTCCGTGATCCATGAAGAAACGGGAATAATAGATTCTTCTAATTCACAAATCCATAGAGATTGGATCCCAAAGATCAGCTTCTCCTCTGGCAGTAGTGGAAACCAATTACAAATTGATGATGATGATGATGATAACAATTTCAAGCCATTGAGCCAAGAATTTTCACTATATCATGACCACCATAGTCTAAGTTCTTTAAACCGTGGTTGTTTCCCAATTGGATCAGCCTCATATATTGGTAACCCTTCAACTTTACAAAGCTTATATGACCCTAATCCTCATCATCCACAACACTACTCACTTTTCACCAACCGTCCCATGTCCTATTCATCAAAAGCATGTTATGGGACACCCTGCACTGAACTACCTCCAACATGGTCTAAAGTCTCTACTTTTTTGAAGCCCACAACAATTGCAAAGCAACAACAACAACACCCTAATATTGGACTTCACTTTTCTAACAACACTCCTTTCTGGAATAATGCTTCAGCCGAGGCACCTCACGACATAAGAGTAGGTACGTTTGCTTCATCATCACAATCACAATCACAATATCAAAGGCCAAGAACAACCTTTGATGAAGAGAAACACAATTCCCCAAGTACTCTATTAAACAAGCGTAATAGTGAAGAAATAACTCTAGAGTCGGTATCAATGGCTAAGAAAAATGTTTGTGAACCAGCATTAAAGAGGCCAAGAATTGAAACTCCATCTCCACTGCCAACTTTTAAGATTTTAATCATCAACTTGACATGCATGTATGGACAGGTTCGGAAAGAGAAGCTAGGGGACCGGGTCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATTAAGTTCCTTCACGATCAAGTCAATGTTTTGAGTACTTCATATATGAAAAATGGAGTTCCCATTCAACAGCAGCAGGGGTACTGTGATGATCTGAAAGAGTCTGAAGCTGGACCACAAGTAGAAGATTTAAAAAGCAAAGGGCTGTGTCTGGTACCGATTTCAAGCACATTTCCAGTGTCAACAGAAACCACCACTACTGCTGCTGCTGAGTTGTGGACGCCAACATTCAGAGGCACACTCTTCTCTTAA 1566 0.41 MAEEFQARICGENWWSSTTTIDSTRTVLFPLSSSSSSSSSISSPCSVAAVNNDAGNYNLKATKFCAETEETNNTYLGFVDDIAQKPHNKSELLSSSASASGSSSGGMLIDSTLQMMGFGLTSSTASENWNQPLLFRCNGRAAESNFHSVIHEETGIIDSSNSQIHRDWIPKISFSSGSSGNQLQIDDDDDDNNFKPLSQEFSLYHDHHSLSSLNRGCFPIGSASYIGNPSTLQSLYDPNPHHPQHYSLFTNRPMSYSSKACYGTPCTELPPTWSKVSTFLKPTTIAKQQQQHPNIGLHFSNNTPFWNNASAEAPHDIRVGTFASSSQSQSQYQRPRTTFDEEKHNSPSTLLNKRNSEEITLESVSMAKKNVCEPALKRPRIETPSPLPTFKILIINLTCMYGQVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYMKNGVPIQQQQGYCDDLKESEAGPQVEDLKSKGLCLVPISSTFPVSTETTTTAAAELWTPTFRGTLFS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1985 521 CDD bHLH_AtbHLH_like 403 450 IPR045239 -
Aed10g1985 521 Gene3D - 400 464 IPR036638 GO:0046983
Aed10g1985 521 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 393 442 IPR011598 GO:0046983
Aed10g1985 521 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 403 460 IPR036638 GO:0046983
Aed10g1985 521 MobiDBLite consensus disorder prediction 322 349 - -
Aed10g1985 521 PANTHER TRANSCRIPTION FACTOR BHLH123 81 506 - -
Aed10g1985 521 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 81 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1985 Aed-Chr10 23964163 23967849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1985 299 520 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 48.444 1.31e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1985 - - gmx:100813887 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1985 10 23964163 23967849 Aed4g1926 4 23122999 23126049 PCT