Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1982 ATGTTTCGCTTAATCTCCAACTACACTCTCCTCTCTCCTCTCAACCAAACCATTTCCCAACCCGAAACCCTAATTTCAACCCTCACTTCCAATTCCTCCTCCTCGGATTCCAAAATTGACTCCCTCAACCACCTCACGCGCCTCTCCAAGCGCGACTCCGCGTTCCGACGGAGGCTCGCGGACTCCGGCGCCGTCCCAGCCGTCCTATCCGCCGTGGACGACCCCAGCCTCCAGGAGAAGGCGCTCCCGCTCCTCCTCAACCTCACCCTCGACGACGACTCCAAGGTCGGCCTCGTCGCCGAGGGCGTCGTCGCGCGCGTGGTGGCGGTGCTCCTCCACGCTCCGCCGGACTGCCGCGCCGTCGCGGCCACGATCGTCACGAGCCTCGCGGTCGTGGAAGTCAACAAGGCCACCATCGGAGCCTTCCCGGCGGCGATCGCGGCGCTTGTGGCGATCCTCCGCGACGGCAAGGGGCGGGAGCGGAAGGAGGCCGCCACCGCGCTCTACGCGCTCTGCTCCTTTCCGGATAACCGGAGAAGAGCCGTGAACTGCGGCGCGGTGCCGATTCTCCTCCGGAACGTCGAGATTGGACTCGAACGGTGCGTTGAGGTGATCGGCGTTCTGGCGAAGTGCAAAGAAGGGAGAGAACAAATGGAATCTTTTAGCGGTTGTGTTCAGATTCTGGGTCGCGTTTTGAGGAACGGAAGCTTGAGAGGGATTCAATATGCGCTCTTTGCACTCACTTCGCTTTGCTCTTATAGCCAGGGAATGGTTCTGGTGGCTCTGGAAGAAGGGGTTCTAGAAGCTTCTCTTGGGTTTGTGGAAGATGATAATGAGAAAGTGAGGAGGAATGCGTGTAATTTGATTAAGGTTCTGCGTTTCAACCACAATCGGGTGAGGTGA 903 0.5925 MFRLISNYTLLSPLNQTISQPETLISTLTSNSSSSDSKIDSLNHLTRLSKRDSAFRRRLADSGAVPAVLSAVDDPSLQEKALPLLLNLTLDDDSKVGLVAEGVVARVVAVLLHAPPDCRAVAATIVTSLAVVEVNKATIGAFPAAIAALVAILRDGKGRERKEAATALYALCSFPDNRRRAVNCGAVPILLRNVEIGLERCVEVIGVLAKCKEGREQMESFSGCVQILGRVLRNGSLRGIQYALFALTSLCSYSQGMVLVALEEGVLEASLGFVEDDNEKVRRNACNLIKVLRFNHNRVR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1982 300 Gene3D - 196 293 IPR011989 -
Aed10g1982 300 SUPERFAMILY ARM repeat 23 293 IPR016024 -
Aed10g1982 300 PANTHER U BOX DOMAIN-CONTAINING 3 293 - -
Aed10g1982 300 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 8 3 293 - -
Aed10g1982 300 Gene3D - 21 195 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1982 Aed-Chr10 23949407 23952202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1982 19 292 U-box Gene Family AT4G21350 59.420 1.03e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1982 - - gmx:100785141 457.988