Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1979 ATGATTTTGCATTTAGTATTTTGCATGAAATCACTTTTCCCATTGACACTTTTCGAAACAAAGTTAAACAGTGGTGTTCTATTTGGACATGACATAGGGATTGAAGGTGGTTCTCACAAGACAAGTGACACAGTTAAGGGCAGGTTGATGGAAGGTCAGAACATTGCAGTGAAGAGATTATCAAAAAATTCTGGGCAAGGAATTGACGAGTTTAAGAATGAGGTCAAGTTAATCGCCAAGCTTCAACATAGAAATCTTGTTCGGCTGCTTGGTTGCAGCATTCAGATGGATGAGAAGATGCTAGTGTATGAGTACATGGAAAATAGAAGCCTTGATGCCTTTTTGTTTGAAAGGCTAATCCTAAATACAGAATTACTAACTCGAAATAAATTAAATTCTGAATTAGGGTGCATGAGGCAAACCCAGAGCAAGTCAAAGTCTTGTGTGTACATGACTGACTAG 462 0.381 MILHLVFCMKSLFPLTLFETKLNSGVLFGHDIGIEGGSHKTSDTVKGRLMEGQNIAVKRLSKNSGQGIDEFKNEVKLIAKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAFLFERLILNTELLTRNKLNSELGCMRQTQSKSKSCVYMTD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1979 153 PANTHER - 47 119 - -
Aed10g1979 153 SUPERFAMILY Protein kinase-like (PK-like) 45 120 IPR011009 -
Aed10g1979 153 Pfam Protein tyrosine and serine/threonine kinase 51 127 IPR001245 GO:0004672|GO:0006468
Aed10g1979 153 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 119 - -
Aed10g1979 153 Gene3D Phosphorylase Kinase; domain 1 27 105 - -
Aed10g1979 153 ProSiteProfiles Protein kinase domain profile. 30 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1979 Aed-Chr10 23936394 23939809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1979 46 117 Receptor kinase-like Gene Family AT4G21410 65.278 2.63e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed10g1979 PK_Tyr_Ser-Thr 3.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1979 - - gmx:106799702 139.813