Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1954 ATGCACGGAAGGGCGAGAGAGAAGCGCAGTTTGGATTCGGCTTCCGCCGAAGAAGGTCAACCTGATCGAAAGCGACCAGCGTTAGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAACCTGTTCTACGCAGAGTTGTTAGTGAAGAAGTTGAACGCGCTTTGGCAAAACTAGGCCCTGCCAGTTCCAAGCTTACTACTGGCAGGTCTTCCCCGAAACAAATTGAAGGCTCCAATGGCAAAAATTTACAACTGCAATTCAAGACCAGGCTTTCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGTGAGCAAGGGGCAGCCATACATATTTTTTTGATTGATGCAAATACTGGCCATATTGTCACAACAGGGCCAGAGTCATGTGTCAGGGTAGATCTTATTGTACTAGAGGGAGATTTCAATAACGAGGATGATGATACTTGGGATGTAGAAGAGTTTGATAGTCATATTGTGAAAGAGCGGGAAGGGAAAAGGCCTCTTCTAACTGGTGATCTGCAAGTCACACTGAAGGATGGCGTAGGAACACTTGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTTAGATTGGGGCTGAAAGTTGCCTCAGGTTGTTGTGAGGAAATGCGTATCCGTGAAGCAAAATCAGAACCTTTCACGGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCTTTGAATGATGAGGTCTGGAGACTGGAGAAAATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAATCTGGAATATTTTCGGTTGAAGACTTCTTAAGACTTGTGGTTAGAGACCCTCAGAGATTGCGGAATATTCTTGGTAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCGAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGAAGCGTGGGTGTTGTTTTCAATAACATTTATGAATTAGGTGGCTTAATTGCCAACGACCAATATTACTCAGCTGATTCACTCTCCGAGAATCAAAAGGTTTATGTAGACACGTTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGATAAATGATGACAATGAGGATAATAAGACTTTGGATGCCACTCATCCTCAGGCTCCAATGACTTCTCATGAATATTCAAACTCACTTCAGCAGACATCCATCCCAGCTTTGCCACTTCCAGTACATGCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGGGACAACTCCCAGATTCTCCTTGCAGCCGCAGAATCATAGTCTTAATTCTTCCATTCAGTTTGATGATAATGCATTTCCACTACAAAACCAGTTGATGAGTGTTTCACACCATGGCCAAGCACAATCATCCACGCATGGCTTCGACCACCACCCTGCCAGCATTTCAAATCCTACTACTTACAACAGAGGAGTTGAAGAGTACTTCCCAGAGGAGGAAATTCGTATTAAAAGTAATGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTTATTTTAACATGGGAAGCCAACCAAATCCTACTACCTTTAATAATTCCCACGATGATGGATACCCCCCAAGTTCATCCACATACATTTCTGCAAACCCCATTATGGGATACAATTTTGATGATGAACCAAACCGTTCTTCGGGAAAAGCCGTTGTGGGCTGGCTCAAGCTGAAGGCAGCTTTAAGATGGGGTATTTTTATTCGGAAGCAGGCTGCTGAGAGACGGGCACAACTAATTGAATTGGATGACCTCTAG 1875 0.4363 MHGRAREKRSLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPVLRRVVSEEVERALAKLGPASSKLTTGRSSPKQIEGSNGKNLQLQFKTRLSLPLFTGGKVEGEQGAAIHIFLIDANTGHIVTTGPESCVRVDLIVLEGDFNNEDDDTWDVEEFDSHIVKEREGKRPLLTGDLQVTLKDGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKSGIFSVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPDDARSVGVVFNNIYELGGLIANDQYYSADSLSENQKVYVDTLVKKAYENWMHVIEYDGKSLINDDNEDNKTLDATHPQAPMTSHEYSNSLQQTSIPALPLPVHAGQPSMDSGVTVGGYHDGTTPRFSLQPQNHSLNSSIQFDDNAFPLQNQLMSVSHHGQAQSSTHGFDHHPASISNPTTYNRGVEEYFPEEEIRIKSNEMLENEDMQHLLRYFNMGSQPNPTTFNNSHDDGYPPSSSTYISANPIMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLIELDDL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1954 624 MobiDBLite consensus disorder prediction 1 24 - -
Aed10g1954 624 MobiDBLite consensus disorder prediction 489 509 - -
Aed10g1954 624 PANTHER OS02G0177800 PROTEIN 3 622 IPR012416 GO:0005516
Aed10g1954 624 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Aed10g1954 624 PANTHER CALMODULIN-BINDING PROTEIN 3 622 - -
Aed10g1954 624 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Aed10g1954 624 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1954 Aed-Chr10 23740677 23745083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1954 6 619 Calmodulin-binding Proteins AT5G57580 58.436 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1954 - - gmx:100812605 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1954 10 23740677 23745083 Aed4g1895 4 22936365 22940874 PCT