Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1937 ATGGATAACATTGTATTAAAGCTTTTGACTAGTTTATACATCTTGGTTCTTTTACTTTTTCTATCTTATAGGCCTGCTGTTTCATTTTCTTCTAGGCATAGGCAACATTGGGGTGGTGGTGGTGGTAGGATATTGAGCTATGGTCGTGATCATAATGGTGATCTTGTGAGTGACTTGCCTGGCCAGCCTAGGGTAAATTTCCAGCACTATGCTGGACATGTTACTGTCAATGAAATCAATGGAAGAGCACTCTTTTACTGGTTCTATGAAGCTATCACCAAGCCAGAAGATAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCAAGGCCTCAAATTTAATAACTTCTCATGGAACAGAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTCAAATACAAGCAGTGACTATGACAAATTGGGAGATGACTTGACAGCTAATGATGCATACTCTTTTCTTCACAATTGGTTCCTGAAGTTTCCATCATATAGAACGAGTACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCCCTCTATATTGATCTCAAGGGTATTTTGTTGGGTAATCCTGAAACATCTGATGCTGAGGATTGGATGGGACTGGTTGATTATGCATGGAGCCATGCAGTGATATCTGATGAAACTCATAAAATAATAAAAAGGAGTTGTGACTTTAACAGCAGTGATCCATGGCGCAATGAAGATTGTAGCGAAGCTGTTGATGAAGTTATGAAACAATACAACGAAATTGATATCTACAGTCTCTACACCTCTGTCTGCTTTGCCAGTACAGCACGTTCAGACGATCAATCCATGCAAACTTCCATGAATAAGCGTTCATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCATGCTTGGATGACTATGCGAAAACATTTTATAATAAACCAGATGTTCAGAAGGCTCTCCATGCCAGCGATGGTCACAATCTAAAGAAATGGAGCATTTGCAACAACAAGATATTCAATGACTGGGGAGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTCATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGATACAGATGGTAGAGTACCAGTGCTGTCCACAAGGTACAGCTTAAGCTCTCTTGCGTTGCCTGTCACTAAATCATGGAGGCCTTGGTACCATGATAATGAGGTTAGCGGGTGGTTTGAAGAATATGAGGGGCTTACATTTGCAACGTTTCGAGGAGCTGGACATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTAGCGTTCTTCTCCTCCTTTCTCAATGGAGAATCGCCACCTTCTACTAAATAA 1470 0.419 MDNIVLKLLTSLYILVLLLFLSYRPAVSFSSRHRQHWGGGGGRILSYGRDHNGDLVSDLPGQPRVNFQHYAGHVTVNEINGRALFYWFYEAITKPEDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNREANMLFLESPVGVGFSYSNTSSDYDKLGDDLTANDAYSFLHNWFLKFPSYRTSTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHKIIKRSCDFNSSDPWRNEDCSEAVDEVMKQYNEIDIYSLYTSVCFASTARSDDQSMQTSMNKRSSKMMPRMLGGYDPCLDDYAKTFYNKPDVQKALHASDGHNLKKWSICNNKIFNDWGDSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKSWRPWYHDNEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNGESPPSTK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1937 489 Gene3D - 388 482 - -
Aed10g1937 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 486 IPR001563 GO:0004185|GO:0006508
Aed10g1937 489 Gene3D - 341 377 - -
Aed10g1937 489 ProSitePatterns Serine carboxypeptidases, serine active site. 199 206 IPR018202 GO:0004185
Aed10g1937 489 Gene3D alpha/beta hydrolase 51 309 IPR029058 -
Aed10g1937 489 Pfam Serine carboxypeptidase 61 482 IPR001563 GO:0004185|GO:0006508
Aed10g1937 489 PANTHER CARBOXYPEPTIDASE 11 486 - -
Aed10g1937 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Aed10g1937 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Aed10g1937 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Aed10g1937 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Aed10g1937 489 SUPERFAMILY alpha/beta-Hydrolases 53 483 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1937 Aed-Chr10 23595804 23599950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1937 346 483 Calmodulin-binding Proteins AT2G22960 35.252 1.77e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1937 K16297 - gmx:100815993 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1937 10 23595804 23599950 Aed9g0607 9 4212062 4214695 PCT