Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1933 ATGCCAGAGGAAATGGCAAGAGAGGAATTATACTCTGAATCCCAGAGGAGGCTGCAGTCAGAAGAAGCAAAGCAAGACATCTATTTGAAAGTTAACACACCTCTTACCCTCAAGTTTGAAGATGTTGTGCATAAAATAAAAATTAGCAAAGGGAAAGGCTTGTTATGCAACAAAGAGGCAAGTTCTGAGGAGATAAAAGTCTTGAAAGGGATCAGTGGTGTTATTTTTCCAGGTGAATTGTTAGTCATCTTAGGCCCTTCTGGTTGTGGCAAAACAACTCTGTTAGCTGCATTAGGAGGCCGGCTCAACCGCGGTGTCACTCGAGGAAACGTAACCTACAATGGCAAGCCCCTCTCAAAATCAGTGAAGCAAAACCTTGGATTTGTTGCTCAGCAAGATGTCTTCTATCCTCACTTATCAGTCAGTGAGACACTAGTCTTTTCGGCTCTTCTTCGCTTACCGAACAGCGTCTCTAAAGAAGAGAAAATCTTGAAAGCTCAGGCAATTATGAATGAACTTGACCTCACTCATTGTAAGGACACTATAATGGGAGGGCAACTTCTAAGAGGAGTTTCAGGTGGAGAATGGAAAAGAGTTAGCATAGGGCAGCAACTTTTAACTAATCCAAGTCTCTTGCTTGTTGATGAGCCAACTTCAGGTCTTGACTCAACTACTGCTAGAAGAATTGTGGTAACTCTCTGTGATTTAGCTAAAGATGGAAGGACTGTCATAATGACTATCCACCAGCCTTCCAGCAAACTTTTCTACATGTTTCAGAAGGTTTTGCTGTTATCAGATGGTAGTAGCCTGTACTTTGGTAAAGGAGAAAATGTTATGAACTACTTCGCCAGTATCGGTTTTGCTCCATCTGTAGCTATGAATCCAACAGATTTCTTACTTGATCTTGCAAACGGTATTTATTCTGAAAATTTGGAAGGGGATACAAATGCTACAAAACAGGTGTTATCATCTGCTTTTGAGAGTAACCTTGCAAGTCAAGTGAAGATGGAACTTCAAATTTCCAGGGATTCATTCCATCACAATTCAGAAGATGAGATATTTGGTCAACGTTGCACAACTTGGTGGCAGCAGGTTACTATATTACTAAGAAGGGGTTTCAAAGAAAGAATGTATGAGCATTTTTCACCCTACAAAATCTGTCATGCTCTCTTCACCTTCCCTCAGGATCGCCAAATGATAATAAAGGAAAGGTCCCTCTACATGTATAGACTCTCATCTTACTTCATAGCAAGTAGTATTGGTGATCTTCCATTGCAGCTAGCCTTGCCAACCCTTTTCGTCACCGTTACTTATTGGATGGGAGGGCTAAAAGCCAGTGCTTCGATTTTCCTTCGAACTCTAGCTGTTGCTCTTCTCTATGCTTCGGTATCACAAGGTTTTGGCCTTGCTGTTGGAGCAGTGCTGGTGAAAAATCAAAGAATGGCTGCTACAGTTGGAACTGTGGTCATGACATTATTTCTTCTAGTTAATGGCTTCTTTGTTAGAAATACACCAGCATCTGTGTCCTGGATAAAGTACCTATCTCATAGCTATTATTCCTATAAGCTCTTGCTTGGATCACAGTTTAACTCTCATGACACTTACCATTGTGGTCCAACTCCAAATGTCACTTGCTCAGTTGTGAACTTTCCTACAATTAAGCATGTAGGCATTGACATGCAAGGTTTCTCTGTTGCAGTTTTGGTTGCAATGCTTGTAGGCTACAGACTTATTGCTTATTTTGCCCTTAAGACTGGCACTAAACATAACTAG 1773 0.4112 MPEEMAREELYSESQRRLQSEEAKQDIYLKVNTPLTLKFEDVVHKIKISKGKGLLCNKEASSEEIKVLKGISGVIFPGELLVILGPSGCGKTTLLAALGGRLNRGVTRGNVTYNGKPLSKSVKQNLGFVAQQDVFYPHLSVSETLVFSALLRLPNSVSKEEKILKAQAIMNELDLTHCKDTIMGGQLLRGVSGGEWKRVSIGQQLLTNPSLLLVDEPTSGLDSTTARRIVVTLCDLAKDGRTVIMTIHQPSSKLFYMFQKVLLLSDGSSLYFGKGENVMNYFASIGFAPSVAMNPTDFLLDLANGIYSENLEGDTNATKQVLSSAFESNLASQVKMELQISRDSFHHNSEDEIFGQRCTTWWQQVTILLRRGFKERMYEHFSPYKICHALFTFPQDRQMIIKERSLYMYRLSSYFIASSIGDLPLQLALPTLFVTVTYWMGGLKASASIFLRTLAVALLYASVSQGFGLAVGAVLVKNQRMAATVGTVVMTLFLLVNGFFVRNTPASVSWIKYLSHSYYSYKLLLGSQFNSHDTYHCGPTPNVTCSVVNFPTIKHVGIDMQGFSVAVLVAMLVGYRLIAYFALKTGTKHN 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1933 590 Pfam ABC-2 type transporter 390 529 IPR013525 GO:0016020|GO:0140359
Aed10g1933 590 Pfam ABC transporter 68 219 IPR003439 GO:0005524
Aed10g1933 590 SMART AAA_5 77 268 IPR003593 -
Aed10g1933 590 Gene3D - 55 285 IPR027417 -
Aed10g1933 590 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 384 585 - -
Aed10g1933 590 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524
Aed10g1933 590 Pfam ABC-2 type transporter 248 315 IPR043926 GO:0140359
Aed10g1933 590 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 388 - -
Aed10g1933 590 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 19 388 - -
Aed10g1933 590 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 384 585 - -
Aed10g1933 590 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 291 IPR003439 GO:0005524
Aed10g1933 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1933 Aed-Chr10 23576542 23579684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1933 61 277 Calmodulin-binding Proteins AT2G36910 28.509 1.26e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1933 K05681 - gmx:100800295 991.875