Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1912 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAAGAATCCTTCTCATACCCCTAATGAGATTGATGTACTAAATAGCTATGTTGAAATTTTCCAGGGAACCTTAAAAAATGGAAGGCAGGTAGCAGTGAAGACACTTTCAGTGGGGTCAAAGCAGGGAGTTCGGGAATTTTTAGCTGAAATTAGAACTATATCAAATGTTAAGCATCCGAACCTTGTTGAATTGGTTGGTTGCTGTGTTCAAGAACCTAATCGTATATTAGTGTACGAATATGTGGAAAATAACAGCCTTGATAGTGCATTACTTGACATGATTGGAGTCCCTGAGGAAGAGGTAATAAGGTACATGAAGGTTGCTTTTTTCTGCACACAAGCAGCAGCAAGTAGAAGGCCAGCGATGTCACAGGTTGTTGAAATGCTGTCCAAGAATATAAGGCTCAATGAAAAGCAATTAACAGCACCAGGGTTTTTCCAGGATTCAGGAGCTTCCTCTCAGAAGAAGTCATCTTTTGAATCCACAAGCTATCAATTTAGCTCTAACCCTTCCAGTATTACTCAGTTGGCCCCACGGTGA 582 0.4107 MSCGCFGASTLKKKKNPSHTPNEIDVLNSYVEIFQGTLKNGRQVAVKTLSVGSKQGVREFLAEIRTISNVKHPNLVELVGCCVQEPNRILVYEYVENNSLDSALLDMIGVPEEEVIRYMKVAFFCTQAAASRRPAMSQVVEMLSKNIRLNEKQLTAPGFFQDSGASSQKKSSFESTSYQFSSNPSSITQLAPR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1912 193 MobiDBLite consensus disorder prediction 160 193 - -
Aed10g1912 193 SMART tyrkin_6 25 191 IPR020635 GO:0004713|GO:0006468
Aed10g1912 193 PANTHER - 110 185 - -
Aed10g1912 193 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 107 - -
Aed10g1912 193 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 110 185 - -
Aed10g1912 193 SUPERFAMILY Protein kinase-like (PK-like) 32 120 IPR011009 -
Aed10g1912 193 Pfam Protein tyrosine and serine/threonine kinase 31 129 IPR001245 GO:0004672|GO:0006468
Aed10g1912 193 PANTHER - 33 107 - -
Aed10g1912 193 Gene3D Phosphorylase Kinase; domain 1 28 96 - -
Aed10g1912 193 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1912 Aed-Chr10 23413026 23416493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1912 113 192 Receptor kinase-like Gene Family AT1G56120 35.000 7.95e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed10g1912 PK_Tyr_Ser-Thr 3.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1912 - - gmx:100775344 147.902