Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g1874 | ATGTTTGGTGGTAGTAACAGTGAGAAAATGGTAGGAGTCACCCCTCAAACAGCGTCTAACAAATGGACACAGATACATGATCAGAAGGCCCCTATGGGAAAAGCCATGGAAAAACCAAGCCAAGATCTGGTTCAGCTGCAGCAACAAGCCCTCAAGTGCCCTCGCTGCGACTCTTCCAACACCAAGTTCTGCTACTACAACAACTACAGCTTGTCACAGCCTAGGCACTTTTGCAAAGCCTGCAAGCGTTACTGGACAAGAGGTGGCACTCTCAGAAACGTTCCCGTTGGTGGCGGCTGCAGAAAAAACAAGCGTCTCAAGCGTCCACACGGTTTTTCATCTGGGTTTAGTGAGAATAATAATAATGGGTTTAGTACTTCAAACAGCAACAACAACTTTCTTTCTGCTTATAACTCCATCTTTGGTTCTTCTTCTTCCTCAACTTGTGCACCCTCAACTCCTGTTATGGCTTCCTTGCTGAGTTCCACTCTTCTTCAACACAAGTTTATGGGTGGTGGTGGTGGTGGTGGGGTGAAGGGTGATCATCAAGGTGGCAACACTTTCTTCCATGGCTTGGCACCGCTACAAGGGTTGCAAGTTGAAGGGAACAACAACAACAATATTGGTTCGAAAGAAGTGAAAGGTGAAGGACAAAACAGGTTTGAGTGGAGTAGTAATAATAACAACAACAATGGTGGTGGTGGTGGTTGTCAAAACCAGATGGAGCATGTGGGTTTGTCTGACCCTAATTCGCTTTATTGGAACACTGCTTGGAGCACTGATCAACCTAACATTGGTCCTTCAGTCACTTCTCTGATCTAG | 822 | 0.4599 | MFGGSNSEKMVGVTPQTASNKWTQIHDQKAPMGKAMEKPSQDLVQLQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPHGFSSGFSENNNNGFSTSNSNNNFLSAYNSIFGSSSSSTCAPSTPVMASLLSSTLLQHKFMGGGGGGGVKGDHQGGNTFFHGLAPLQGLQVEGNNNNNIGSKEVKGEGQNRFEWSSNNNNNNGGGGGCQNQMEHVGLSDPNSLYWNTAWSTDQPNIGPSVTSLI | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g1874 | 273 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-LIKE | 5 | 110 | - | - | |
Aed10g1874 | 273 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-LIKE | 113 | 262 | - | - | |
Aed10g1874 | 273 | Pfam | Dof domain, zinc finger | 49 | 105 | IPR003851 | GO:0003677|GO:0006355 | |
Aed10g1874 | 273 | ProSitePatterns | Zinc finger Dof-type signature. | 53 | 89 | IPR003851 | GO:0003677|GO:0006355 | |
Aed10g1874 | 273 | ProSiteProfiles | Zinc finger Dof-type profile. | 51 | 105 | IPR003851 | GO:0003677|GO:0006355 | |
Aed10g1874 | 273 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 5 | 110 | IPR045174 | GO:0003700|GO:0006355 | |
Aed10g1874 | 273 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 113 | 262 | IPR045174 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g1874 | Aed-Chr10 | 23082968 | 23084199 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g1874 | 1 | 109 | C2C2-Dof Transcription Factor Family | AT1G28310 | 58.716 | 3.01e-37 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Aed10g1874 | zf-Dof | 9.1e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g1874 | - | - | gmx:778101 | 219.935 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed10g1874 | 10 | 23082968 | 23084199 | Aed9g0552 | 9 | 3852790 | 3855113 | PCT |