Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed10g1872 | ATGGCGGAGATTTCAGGTTCAGCGTTCAAGGAATACGTGGCTGGCATGTTCGCTGGTGTTGCCACTGTAGCCACTGGCCACCCCTTTGACACCGTCAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATATGATTCAGTATAGAAATGGATTGCATTGCACTTCTAGGATATTGAAGGCTGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTCTTGGGATGGCAGTTGAAGGATCACTCTATTTTGGAATTTATTCCCAAGCAAAAGTGTACCTTCAGGGAGGAGTTCAAACTGCGGAACCACGGCTTCAAGTGATAATACCGTCTGCAGCTTTTAGTGGTGCCATCATCAGTTTTGTGTTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATACAAGGCACTGACTCTTTGGTTCCTAAATCCAGTAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACTGTACAAACTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTAGTGCCACATTGCTTAGAGAATCTATAGGGAATGGTGTCTTTTTCAGTGTATACGAATATGTGCGCTATCACATGCATTCCAATACCAAAGCTGCTCCATCCAATTACAGCAACATGGTTGATATTGGGATTGGGATCGTTAGTGGTGGCCTTGGTGGTGTGGCTTTTTGGTTGACAGTTTTGCCTTTTGATGTGGCAAAGACTTTAATTCAGACAGACCTTGATAAAAATTGTCCAAGAAATCCTTTTCGGGACGCATTCAACATTGCATTTGAAGGTGCTTATTTAGTTTCATTTTTTACTAGAGAGCTTGGTTAA | 837 | 0.4277 | MAEISGSAFKEYVAGMFAGVATVATGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTSRILKAEGIKGLYRGATSSFLGMAVEGSLYFGIYSQAKVYLQGGVQTAEPRLQVIIPSAAFSGAIISFVLGPTELIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVQTEGVKGIFRGGSATLLRESIGNGVFFSVYEYVRYHMHSNTKAAPSNYSNMVDIGIGIVSGGLGGVAFWLTVLPFDVAKTLIQTDLDKNCPRNPFRDAFNIAFEGAYLVSFFTRELG | 278 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed10g1872 | 278 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 132 | 266 | - | - | |
| Aed10g1872 | 278 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 6 | 132 | - | - | |
| Aed10g1872 | 278 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 6 | 95 | IPR018108 | - | |
| Aed10g1872 | 278 | Gene3D | Mitochondrial carrier domain | 111 | 266 | IPR023395 | - | |
| Aed10g1872 | 278 | Gene3D | Mitochondrial carrier domain | 3 | 110 | IPR023395 | - | |
| Aed10g1872 | 278 | Pfam | Mitochondrial carrier protein | 7 | 97 | IPR018108 | - | |
| Aed10g1872 | 278 | Pfam | Mitochondrial carrier protein | 113 | 199 | IPR018108 | - | |
| Aed10g1872 | 278 | PANTHER | - | 132 | 266 | - | - | |
| Aed10g1872 | 278 | PANTHER | - | 6 | 132 | - | - | |
| Aed10g1872 | 278 | SUPERFAMILY | Mitochondrial carrier | 8 | 259 | IPR023395 | - | |
| Aed10g1872 | 278 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 105 | 197 | IPR018108 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed10g1872 | Aed-Chr10 | 23060378 | 23065309 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed10g1872 | 25 | 244 | Antiporters | AT1G79900 | 30.180 | 1.48e-28 | 108 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed10g1872 | K15109 | - | gmx:100815087 | 450.669 |