Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1857 ATGGATTCTGACTTTTGGACCTCGCGTCTTGCTGCCGCTAAACGCCAATACACGCTTCAGCATCACCATCCAAATTCTCATTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCAGATTTCCCTTGCCCGTATTGTTATGAAGACTTTGACATCGCGTCTTTGTGTTCTCATCTTGAAGATGAACATTCTTGTGAATCAAGAGTCACGATTTGTCCTATATGCTCCGTTAAAGTTGCACGGGACATGTTAAGTCACATAACGCTGCAGCATGGGCATTTATTTAAGATATCCTTTAGAAGGCGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACCTTGTCTCTTTTGGGTCGAGATCTTCGTGAGGCTCATCTACAGGTGCTTCTTGGCGGCGGTGGCGGCGGCGGTGGATACCGGTCAAACAGCGCAGCAGTGTCTAATGCTGCTGCTACTGATCCATTCCTATCTTCATTTATTTTGAATTTCCCTGCTTGTGAAGCAGAAGAAATTTCAAAATCTGTGGTAACAAGTGCTGAGGATTCTTCTGCCAAAAATGTGACACCTGAACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTACTGAAGAGCGCGAGAAAAGGATGAGACAAGCTGCTGAGAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTTTGTTAGGGGACTAA 714 0.444 MDSDFWTSRLAAAKRQYTLQHHHPNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSHITLQHGHLFKISFRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGGGGGGGYRSNSAAVSNAAATDPFLSSFILNFPACEAEEISKSVVTSAEDSSAKNVTPEHIWKSSFDPSLSTEEREKRMRQAAERSGFVQDLFLSTLLGD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1857 237 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Aed10g1857 237 Pfam Stress-induced protein Di19, C-terminal 120 234 IPR027935 -
Aed10g1857 237 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 236 - -
Aed10g1857 237 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 236 IPR033347 -
Aed10g1857 237 SUPERFAMILY TRAF domain-like 46 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1857 Aed-Chr10 22975474 22979029 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed10g1857 Di19_C 2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1857 - - gmx:100792230 426.787