Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1853 ATGGAGTCGCGAGTGCTGTCACGCGCCGGAACCTTATCCTCCCTCCCTCACCTCCGCAAGCCGCCGCGGGAGGCCATCTCCGTCGCCTCTTTCGTCTCCGTGAAGGCCGTGGGCTCCGTCGCGGACGGCGGGAACCTGATTTGGGGAAGGCAGCTGCGCCCGGAGCTCTGCTCGCCGGCGCTGAAGAAGGATGCCGTCCTCCTCCGGCCATGCCTCGCCGCCGCCTCCTCGCCGTCCGAGGGGAGTGATTCCGCCGGAGAAGCGAAGGTTGCTCCGGTGGGGTTCTTGGCGAAGTACCCGGCTCTGACAACCGGATTCTTCTTCTTCACGTGGTACTTCTTGAACGTGATTTTCAATATCCTCAACAAGAAGATCTACAACTACTTCCCCTATCCCTACTTCGTATCGGTTATCCATTTATTCGTGGGTGTGGCGTACTGTTTGGTGAGCTGGGCTGTGGGCCTTCCTAAGCGTGCTCCTATAGACTCCAACCTACTGAAGTTGCTCATTCCGGTGGCTGTGTGTCATGCATTAGGCCACGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACTCATACCATTAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGTCAATCAATCCCCATCTCTCTGTGGTTGTCACTGGCTCCTGTTGTCATTGGTGTGTCCATGGCATCTTTGACTGAGCTCTCATTCAACTGGGTCGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTCACTTACAGGAGCATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGTATACCACCTGCCCTAATTGTGGAAGGGCCTACACTGTTGAAGCATGGCTTCAATGATGCTATTGCTAAAGTAGGTTTGGTCAAGTTCATCTCAGATCTCTTCTGGGTGGCTACCAACACACTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGGAACGTACTGAAACGTGTATTTGTCATTGGATTTTCAATTATAGTCTTCGGTAACAAGATTAGCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGTGTGGCACTCTACTCGTTCATCAAAGCCAAGCTGGAGGAAGAGAAGCGACAAGCGAAAGCAGCATAA 1191 0.5097 MESRVLSRAGTLSSLPHLRKPPREAISVASFVSVKAVGSVADGGNLIWGRQLRPELCSPALKKDAVLLRPCLAAASSPSEGSDSAGEAKVAPVGFLAKYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPISLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIVEGPTLLKHGFNDAIAKVGLVKFISDLFWVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSFIKAKLEEEKRQAKAA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1853 396 PANTHER SOLUTE CARRIER FAMILY 35 25 388 - -
Aed10g1853 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Aed10g1853 396 PANTHER BNAC02G47130D PROTEIN 25 388 - -
Aed10g1853 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 282 381 - -
Aed10g1853 396 Pfam Triose-phosphate Transporter family 103 380 IPR004853 -
Aed10g1853 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1853 Aed-Chr10 22938705 22943171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1853 1 394 Antiporters AT5G46110 75.845 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1853 K15283 - gmx:100794336 728.013