Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1851 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGATCATGAACTGGTAATTGCACCAACTATTACTATTACTCCTTCTCCTTCAACAACAAATAACAACAACGTTAACAATCTTGTTACTCATGATCACACAAAATTATCAACCGAATTTCGCACCATAACTTGCCCCTCATGTGGCCACAACATTGAATTCCAAGACCAGAGTGGAATAAATGACTTGCCTGGGTTACCAGCTGGGGTGAAGTTTGATCCGAATGACCAAGAAATATTAGAGCATTTGGAAGCAAAGGTACTTTCTGATATGCCAAAGCTTCATCCACTTATTGATGAGTTCATACCAACGCTTCAAGGAGAGAATGGGATCTGTTATACTCATCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAGATACGGCACTTTTTTCACAGGCCATCGAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTCCACACCGACGAAGAAGGAAGCGAGACAAGGTGGCACAAAACCGGAAAAACCAGACCGGTTTTCGTAGGTGGTTCTGTCAAGGGTTTCAAGAAAATCCTAGTCCTCTACACTAACTACGGAAGACAAAAGAAGCCCGAGAAAACCAATTGGGTGATGCACCAATACCACCTTGGCACCACCGAAGAAGAGAAAGATGGAGAATTGGTGGTTTCAAAGGTTTTCTACCAAACACAACCTCGACAATGTGGTAACAATAACAACAACAATTCAATTATAAAGCAGCATGATCTTTATGATGATCAAGATCAAAGATTGATGATTAATGATGACAACATTAATATAGCACCTAGAAATATTAATGCTGCAGCAACAACAACAACTAGTCTTATGGACTACTATAATAATCCTTCTTTCATAAATTATGATCACCAATTGGGTGGTCGTGGTAGTGTTAATAGAGAAACTTCACCACCTCAACTCATTCCAAATTTGGTCATGCAGGGTGATCATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCACCAACAAAACCAGGCTGGACAGAAAATAG 1059 0.4042 MTWCNDSDEERGIDHELVIAPTITITPSPSTTNNNNVNNLVTHDHTKLSTEFRTITCPSCGHNIEFQDQSGINDLPGLPAGVKFDPNDQEILEHLEAKVLSDMPKLHPLIDEFIPTLQGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTTEEEKDGELVVSKVFYQTQPRQCGNNNNNNSIIKQHDLYDDQDQRLMINDDNINIAPRNINAAATTTTSLMDYYNNPSFINYDHQLGGRGSVNRETSPPQLIPNLVMQGDHSSSFIRLAMDATTNKTRLDRK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1851 352 Gene3D NAC domain 87 242 IPR036093 GO:0003677|GO:0006355
Aed10g1851 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 332 IPR044799 GO:0003700
Aed10g1851 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 332 - -
Aed10g1851 352 ProSiteProfiles NAC domain profile. 78 237 IPR003441 GO:0003677|GO:0006355
Aed10g1851 352 SUPERFAMILY NAC domain 73 237 IPR036093 GO:0003677|GO:0006355
Aed10g1851 352 Pfam No apical meristem (NAM) protein 79 218 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1851 Aed-Chr10 22901172 22906094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1851 1 246 NAC Transcription Factor Family AT4G28500 69.636 2.23e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed10g1851 NAM 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1851 - - gmx:100783888 513.072