Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1843 ATGGATTTGATGAAGAGTAGCAATAATAGCAGTGAATTAGATGAGAGCGAAGTGTACAATGCTCAAATCCATTTGTACAAACATATATTCAACTTCATAAGCTCAATGGCTCTCAAGTGTGCTGCAGAGCTAGGCATAGCAGATGAAATTCACAACCACGGAAAACCCATGAATCTTTCCGAGTTGGCCTCAGCTCTGAAACTGCACCCCTCAAAAGTCGGTGTTCTCCACCGCTACATGCGCCTTCTAACACACAACGGCTTCTTTACAAAAACAACACAGGACAATGGCAAAGAAGAACAAGTGTACTACGCTCTCACTCCTCCTTCCAAGCTTCTAATCAGAAGTAGATCAACCTGCTTAGCATCTATGGTTTTGGGATCGCTTCATCCAACTACGGTGGACACGTGGCACTTCGCAAAGAAGTGGTTCACCGAGGAGGACAAGGATGTGTCGTTGCACAAGAGCGTAATCGGGGAGAGCTTCTGGGACTTCATGAACAAGGATGTTGCTGCTCTGAGTTTGTTTCAAGATGCCATGGCTGCAGATTCTCAAGTGTTCAAGCTAGGTCTCACGCAATGCAAGCACGTGTTTCAAGAACTGGGTTCCCTCGTCGATGTGGGAGGTGGAACTGGTGTCGTCTCGAGGCTCATCAGTGATGCCTTCCCTCACTTGAAATGCACCGTCTTTGACCAGCCACATGTTGTGGCTAACTTGACTGGAACTCCAAATTTGAACTTTTGGATTTTCCATAATTGGAATGACGAAATGTCCCTGAAGTTATTGAAGAACTGCAAAGAAGCCATTTCTAGCACAGGGAAGGTGATAATCATAGACATAGCAATTGATGAAGCAAGTGATGATCGCGAGTTGACCGAGTTGAAATTGGACTTTGACTTGGTTATGTTAACATTGTATAGTGGGAAAGAAAGAGAAAAGAAAGAATGGGAGAAACTCATATACGATGCTGGCTTCAGCAGCTACAAGATTACACCTGTATTTGGTTTTAAATCTCTTATAGAAGTTTATCCTTAG 1035 0.4386 MDLMKSSNNSSELDESEVYNAQIHLYKHIFNFISSMALKCAAELGIADEIHNHGKPMNLSELASALKLHPSKVGVLHRYMRLLTHNGFFTKTTQDNGKEEQVYYALTPPSKLLIRSRSTCLASMVLGSLHPTTVDTWHFAKKWFTEEDKDVSLHKSVIGESFWDFMNKDVAALSLFQDAMAADSQVFKLGLTQCKHVFQELGSLVDVGGGTGVVSRLISDAFPHLKCTVFDQPHVVANLTGTPNLNFWIFHNWNDEMSLKLLKNCKEAISSTGKVIIIDIAIDEASDDRELTELKLDFDLVMLTLYSGKEREKKEWEKLIYDAGFSSYKITPVFGFKSLIEVYP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1843 344 Pfam Dimerisation domain 36 84 IPR012967 GO:0046983
Aed10g1843 344 Gene3D - 6 113 IPR036388 -
Aed10g1843 344 PANTHER O-METHYLTRANSFERASE 11 247 IPR016461 GO:0008168
Aed10g1843 344 Gene3D Vaccinia Virus protein VP39 247 344 IPR029063 -
Aed10g1843 344 Gene3D Vaccinia Virus protein VP39 115 246 IPR029063 -
Aed10g1843 344 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 11 247 - -
Aed10g1843 344 Pfam O-methyltransferase domain 137 238 IPR001077 GO:0008171
Aed10g1843 344 Pfam O-methyltransferase domain 248 326 IPR001077 GO:0008171
Aed10g1843 344 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 344 IPR016461 GO:0008168
Aed10g1843 344 PIRSF O-mtase 1 247 IPR016461 GO:0008168
Aed10g1843 344 PIRSF O-mtase 245 344 IPR016461 GO:0008168
Aed10g1843 344 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 248 344 - -
Aed10g1843 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 343 IPR029063 -
Aed10g1843 344 SUPERFAMILY "Winged helix" DNA-binding domain 16 116 IPR036390 -
Aed10g1843 344 PANTHER O-METHYLTRANSFERASE 248 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1843 Aed-Chr10 22797009 22798499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1843 36 342 Monolignol Biosynthesis Gene Families AT5G54160 30.000 4.93e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1843 K22588 K13259 gmx:100807589 481.1