Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1826 ATGAATTTCCCATCCACTATTCCTCTACCACTTGCAATTGCAACCTATTTATTATTCATTTCCTTTGTTCTCATTAATTGCTACCAAGCTGAGGCTACACATGGAGACAACGACGACAACAGCAACAAGGTTGTATCTATAGGTGCAATAATTGATGTTGACTCTCGAGTTGGGAAAGAACAGCTTGTAGCCATGGACCTCGCAGCTCAAAGTTACAATAACACTTCCAAGAGCCACAAGCTGGCTCTTCATTTTCAGGAACCCACCGTAGATCCCTTCAGACCCACCAATCTTGCTAGAAAGATGATTAATACTCGGAAGGTGCAAGTGATCATAGGGATGCACACATGGACAGAAGCAGCTTCAGTGGCTGAATTAGGCCACAAAGCTCGAGTTCCTGTCATATCCTTTGCAGCACCTACCATCATCCCTTCGTTGATGCCAACTCGCTGGCCTTTCTCGATAAGAATGGCCAACAATGGTACTGCATATGCAAAATGTGTTGCAGATTTGGTGCAAGCTCATAGTTGGCAGAGAGTAGTAGTCATTTATGAAGATGGAGATTATGAGATGCTAGCACTGCTATCTGAGACCCTCCAAGATGTTGGTTCAATGATTGAGTACCGTTTAGCTCTTCCATCGCCTTCCTATCTGCCAAATCCTGGCGAGTTCATTAGCGAAGAGTTGAACAAGTTGATCAGAAATATACAATCGCGGGTGTTCATTGTTCTGCAATCATCATTAGAAATGGTGATTCATTTGTTCAGAGAAGCTTCATACATAGGACTGGTGGATAGAGAATCAGCTTGGATAATCCCAGAGAGAATAACTAATGTGCTTGACTCTGCCAACAAGTCTGCTATTTCCTACATGGAAGGAGCTTTAGGAATCAAGACTTACTACTCTGAACATAGCAGTGAGTATCAAGATTTTGAGGCTAAGTTCCGGAAATCTTTTTGGGGCAAGTATCCTGAGGAGGATAACCGTGATCCGGGATTCTATGCTCTGCAAGCATATGATAGCATTGAACTTGTTGCACAAGCAATAGATAGAATGGCCAGTGGCAGTGGCAGAAAGACTTTGCTGACAGAAATACTGTCTAGCAATTTCCCTGGCTTAAGTGGAGAAATTCGATTTGAAGCAGCGCAGCTTTTGCATAATCCGACCTTCAGGATTGTAAATGTAGATAAGAGTTACAGAGAATTAGATTTTTGGACTCAAGAACGTGGGTTCATCACTAACCTCACTGCAGAACAAGGTTCAAATAGTGTTTCTAGGAACACAGAAAAATTAAGTGGTGTTGTAATATGGCCAGGGAAAGTAAACACAGTTCCAAAGGGATGGAATCTTCCCACTAAACAAAATCCAATGCAAATAGCAGTTCCTGGAAGAGCATCCTTTTCCAAGTTCGTCAAGGTTGATCGTGACGAGCTTACAAATTCTGTTAAGTACAGTGGATTCTGCATTGAAATTTTTAATAAGGTGTTAGACATTTTGGGGTATGATCTGCCATATAATTTTACTCCCATCAATGGAACCTACGACGATCTGGTTCAACTTGTCCACAACAAGACTTTTGAAGCTGTTATTGGAGACATTACCATAATAGAAGAAAGATTGAAGTATGTAGATTTTACTGTGCCATATTTAGAATCAGGATTGTCAATGATAGTTACAGAAAAGTCTTATGAATCGACATGGATGTTTATGAAACCCTTCACCTGGCAAATGTGGGTGGCAACCGGTGCCGTGTTGATTTACACCATGGTAGTTGTGTGGTACCTGGAGCGCAAACCGAATCCCGAGTTTCATGGAAACTGGAAAAGCCAGATCAGCACTGCTCTTATGTTTACCTTCTCCTCTCTATTCTTTGCTCACAGAGAGAAGATCTATAGTGACTTATCTCGCGTGGTGATGGTGTCATGGCTGTTTCTAGTATTGATTCTTAACTCGAGCTACACTGCTAGTCTTTCTTCCATGCTCACAGTCCAACGAATGCAACCGAATGTGACAGACATCCAGTACCTGAAGAGGAACAACCTGAAAATCGGTTGCGCGGATTCGTTTGTTAGGACATACCTGGAGAAAGTTGAAGAATTCAAGGCAGAGAACATCGTAACCATTAAGAATGAATACATTTATGAAGATGCATTCAAAAACAACTCAATATCAGCTGCTTTTCTCGAACTCCCTTATGTGAAAATGTTCAAGAAAGGCTCTCCAGTGGCCAGAGATTTTTCAAAAGCTATACTGAAGCTCTTGGAGCAGGGAGAACTGAAGAAGTTAGAAGACAAATGGTTGAACGATGCAGGAGAGTGCCTCAACAAATCGAACTCTGAGAGTACAGAAAGTTTGAGGCTTGGAAGTTTTTGGGTTCTGTACGTGATCTCTGGTGCCACTTCTACCATTTGTTTTCTACTTTATACAATCCAGTCGCTGAAATCTAGTCGAACAAATGGCAACCCAGGAGGTGATGAAAGCCGATGGAAAAGGGTAGTTATAATAGCTAGGCAGATCTATAGCAGAAAGCATGCAGCAGTGACACCAGAGCATCATCACCAGCCACAGACTCCACAATCACCAGATACTATAACAGTGTCTTCACCACCAACAATTACTATTCACAGCCAACCATAA 2637 0.4198 MNFPSTIPLPLAIATYLLFISFVLINCYQAEATHGDNDDNSNKVVSIGAIIDVDSRVGKEQLVAMDLAAQSYNNTSKSHKLALHFQEPTVDPFRPTNLARKMINTRKVQVIIGMHTWTEAASVAELGHKARVPVISFAAPTIIPSLMPTRWPFSIRMANNGTAYAKCVADLVQAHSWQRVVVIYEDGDYEMLALLSETLQDVGSMIEYRLALPSPSYLPNPGEFISEELNKLIRNIQSRVFIVLQSSLEMVIHLFREASYIGLVDRESAWIIPERITNVLDSANKSAISYMEGALGIKTYYSEHSSEYQDFEAKFRKSFWGKYPEEDNRDPGFYALQAYDSIELVAQAIDRMASGSGRKTLLTEILSSNFPGLSGEIRFEAAQLLHNPTFRIVNVDKSYRELDFWTQERGFITNLTAEQGSNSVSRNTEKLSGVVIWPGKVNTVPKGWNLPTKQNPMQIAVPGRASFSKFVKVDRDELTNSVKYSGFCIEIFNKVLDILGYDLPYNFTPINGTYDDLVQLVHNKTFEAVIGDITIIEERLKYVDFTVPYLESGLSMIVTEKSYESTWMFMKPFTWQMWVATGAVLIYTMVVVWYLERKPNPEFHGNWKSQISTALMFTFSSLFFAHREKIYSDLSRVVMVSWLFLVLILNSSYTASLSSMLTVQRMQPNVTDIQYLKRNNLKIGCADSFVRTYLEKVEEFKAENIVTIKNEYIYEDAFKNNSISAAFLELPYVKMFKKGSPVARDFSKAILKLLEQGELKKLEDKWLNDAGECLNKSNSESTESLRLGSFWVLYVISGATSTICFLLYTIQSLKSSRTNGNPGGDESRWKRVVIIARQIYSRKHAAVTPEHHHQPQTPQSPDTITVSSPPTITIHSQP 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1826 878 MobiDBLite consensus disorder prediction 852 878 - -
Aed10g1826 878 SMART GluR_14 458 769 IPR001320 GO:0015276|GO:0016020
Aed10g1826 878 Pfam Ligand-gated ion channel 769 798 IPR001320 GO:0015276|GO:0016020
Aed10g1826 878 CDD PBP1_GABAb_receptor_plant 46 411 IPR044440 -
Aed10g1826 878 SUPERFAMILY Periplasmic binding protein-like II 433 768 - -
Aed10g1826 878 PIRSF IGluLR_plant 735 868 IPR017103 -
Aed10g1826 878 PIRSF IGluLR_plant 11 736 IPR017103 -
Aed10g1826 878 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 846 - -
Aed10g1826 878 Gene3D - 160 408 - -
Aed10g1826 878 Gene3D - 465 565 - -
Aed10g1826 878 Gene3D - 566 709 - -
Aed10g1826 878 Gene3D - 712 774 - -
Aed10g1826 878 Pfam Bacterial extracellular solute-binding proteins, family 3 481 768 IPR001638 -
Aed10g1826 878 PANTHER GLUTAMATE RECEPTOR 3.4 29 846 - -
Aed10g1826 878 MobiDBLite consensus disorder prediction 845 878 - -
Aed10g1826 878 Pfam Receptor family ligand binding region 63 397 IPR001828 -
Aed10g1826 878 Gene3D - 47 387 - -
Aed10g1826 878 SUPERFAMILY Periplasmic binding protein-like I 42 448 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1826 Aed-Chr10 22699502 22703315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1826 16 813 Ion Channels AT2G29120 30.698 2.49e-123 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1826 - - gmx:100780320 1413.67