Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1818 ATGAGTCCTGGGTGGAGTCTAGGATGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGATGGGGGCTCAAGCCACAGAACAAGAAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCATTGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCTGGAGCTTCTTTCAACATGCAGTTCACCAACTGCTGCAGGGGTGGTGTGCTTACATCTTGGGCCCAGAACCCTTCGGGTGCTGTCTCAGCATTTCAGATTGGTGTTGGCCTCTCTGCCACCTCTAACAAGACTGTCAAATTGCCTAGGAACTTCAAATTGCTTGGTCCAGGACCCGGATACTCTTGTGGCCCTGCCAAGCTTGTTCCTTCCACTGCCATTCTCACCGATGATCTGTCCTGGAATGTAACATGCACTTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGCCAGAATAATAACGATACTTGTGTCACGAAAGATTCAAAGATCCTGCAAGAGACTGTGACCTCGGCTCACCGAAAATCAGACATGACACTCACAACACCAAAACAATGCACACACCACCTGTGTCATGTCCGAGTGCACTGGCATTTGAAAGACAACTATAAGGATTATTGGCGTGTCAAGATGCCATCATCAACTTCAACTATCGATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGACCTGTTGATGGAAGCTGGGGCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAATACATTTACTCTGAAGCAGGGGTGGGCATTTCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGCTCATAAACTACCAACTACTATTACATTGATGGCAGCTTATGTGGCTTTTACATTCTTTTTTTCATTTGGATGTAACACTTTTTTGAGGTACAAGATGAGTTAG 1038 0.4547 MSPGWSLGWTWAKKEIIWAMMGAQATEQENCAKFKLKIPHCCKRNPQVVDLLPGASFNMQFTNCCRGGVLTSWAQNPSGAVSAFQIGVGLSATSNKTVKLPRNFKLLGPGPGYSCGPAKLVPSTAILTDDLSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNNDTCVTKDSKILQETVTSAHRKSDMTLTTPKQCTHHLCHVRVHWHLKDNYKDYWRVKMPSSTSTIDDTGMFYGLKYYNDLLMEAGAKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKLPTTITLMAAYVAFTFFFSFGCNTFLRYKMS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1818 345 Pfam COBRA-like protein 2 140 IPR006918 GO:0010215|GO:0031225
Aed10g1818 345 PANTHER COBRA-LIKE PROTEIN 1 233 - -
Aed10g1818 345 PANTHER PROTEIN COBRA 1 233 IPR006918 GO:0010215|GO:0031225
Aed10g1818 345 PANTHER COBRA-LIKE PROTEIN 238 334 - -
Aed10g1818 345 PIRSF COBRA 233 337 IPR006918 GO:0010215|GO:0031225
Aed10g1818 345 PIRSF COBRA 1 237 IPR006918 GO:0010215|GO:0031225
Aed10g1818 345 PANTHER PROTEIN COBRA 238 334 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1818 Aed-Chr10 22665796 22667695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1818 2 314 COBRA Gene Family AT5G60920 51.667 4.64e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1818 - - gmx:100813134 611.683