Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1806 ATGGAGAAGGAGGATTATGTGATGCTGCTGCAAAGATGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAAGAGGTGGCCGCAAAGGTGATTGAAGAAGGGTTGGCTAAACAAGATGCTAAGGTGAAAGAGATGACAGGTGAGCTTGGTGTGGTGAAGGTGTTGGTTGCTATGGCGGTTTCCGATGTTGATACTCGCCGCCGGGTAGGACTCAGGGCCTTGATCCACCTATGCAATGGAACTGATAACAGAAACAAGGCTTTGATAGTGGAGGCAGGAGTATTGTCCAAACTACCTAAGAAAACTGACCTTGAAGATGAATCAATAATAAGTGAATTTGCAAATTTAGTCTCTTCATTGTCATCTCTAGGAAATATCCAATTTCCTCATTCTTCACTACACTTTCTCCAATTTCTTATAGACATTCTCAAGTCATGCACAAGTTTTGATACCAAACAATCATGTTTGGTGGCCCTGTGCAACATCTCAGCTGTGTTAGAGAATGCAGGGCCTTTGGTTTCAAAAGGGGTTGTACCAATTCTCTTGGAACTTTCCTTGATCAAAGGAGCTTCAGAGAAAGCACTTACCATCCTTGGGAACTTGGGGGTGACTTTAATGGGAAAGAAGGCTATACAGAATAGCTCAATGGTGCCAAAGTGCTTGATTGAGATCTTATCTTGGGAAGATAAACCAAAATGCCAAGAGTTATCATCTTATATTTTGGTTATTCTAGCTCATAAAAGCTCATCACAGAGAGAGAAAATGTTGCAGTCAGAGATTGTCCCTGTACTTCTTGAAGTGGCTCTATTGGGGAGTTCTTTGGCTCGGAAGAGAGCACTGAAATTAGTGCAATGCTTTAAGGATGAAAGGAAAATAAAGATGGGGCCACATTCAGGCCCACAGACTTCAAGAAGAACTGCAAAGGAATCACTTGTAAAACAAAGGGATAGGAATGAAGGGAAGAAAATGATGGAAAATTTGGTGAAAGAAAGTTTGCACAGGAATATGGAAATAATAACTAAAAGAGCAAATGGAGATAAGGATGATGGTGATTCTAATAAGTTTAAGCCTTTGGTTATCAGCACAAGTTCTAAAAGTTAG 1104 0.4085 MEKEDYVMLLQRCVKKLHFGSWEEKEVAAKVIEEGLAKQDAKVKEMTGELGVVKVLVAMAVSDVDTRRRVGLRALIHLCNGTDNRNKALIVEAGVLSKLPKKTDLEDESIISEFANLVSSLSSLGNIQFPHSSLHFLQFLIDILKSCTSFDTKQSCLVALCNISAVLENAGPLVSKGVVPILLELSLIKGASEKALTILGNLGVTLMGKKAIQNSSMVPKCLIEILSWEDKPKCQELSSYILVILAHKSSSQREKMLQSEIVPVLLEVALLGSSLARKRALKLVQCFKDERKIKMGPHSGPQTSRRTAKESLVKQRDRNEGKKMMENLVKESLHRNMEIITKRANGDKDDGDSNKFKPLVISTSSKS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1806 367 MobiDBLite consensus disorder prediction 339 367 - -
Aed10g1806 367 MobiDBLite consensus disorder prediction 293 324 - -
Aed10g1806 367 MobiDBLite consensus disorder prediction 339 355 - -
Aed10g1806 367 MobiDBLite consensus disorder prediction 309 324 - -
Aed10g1806 367 SUPERFAMILY ARM repeat 11 286 IPR016024 -
Aed10g1806 367 Gene3D - 207 292 IPR011989 -
Aed10g1806 367 Gene3D - 8 204 IPR011989 -
Aed10g1806 367 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 367 - -
Aed10g1806 367 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1806 Aed-Chr10 22586817 22588893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1806 36 312 U-box Gene Family AT1G67530 28.819 1.21e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1806 - - gmx:100816066 566.229