Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1805 ATGGATTCTGATGAAGTAAAAGTTGAACCATATGATGATGATGAAGGAGGAAAAAATGGATCCATGTCCTACAGTGCAACTATCTGCTGTGATTTCAGACCTGAAATACTATCTGACCTAAGACAGACCCTTGATTCCCTTCCACTGCATCTAGTGAAGACAGAAATTTCAACTTTGGCAGGTAGAATGAAGAATGTGTTTGTCTTCACATGTTTCAAAGGGAACAACAACATTAATAATAATATTGATGTTGAAAAATGCAAAGCTCTTGCAAGTACTGTTCACCAGGCACTATGTTCTGTACTGGATAAGGCTTCTGCTGCATCACTGGATTTCACCCCAAGAACATCACATGCAAGCAAGAGGAGAAGACTGTGCTTTATTGAAACATCCACTTCCTCATGCAACCATGGATCCTGTTTGTGCTGA 429 0.3986 MDSDEVKVEPYDDDEGGKNGSMSYSATICCDFRPEILSDLRQTLDSLPLHLVKTEISTLAGRMKNVFVFTCFKGNNNINNNIDVEKCKALASTVHQALCSVLDKASAASLDFTPRTSHASKRRRLCFIETSTSSCNHGSCLC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1805 142 PANTHER TRANSCRIPTION FACTOR BHLH30 1 135 IPR045847 GO:0003700|GO:0006355
Aed10g1805 142 CDD ACT_UUR-ACR-like 27 98 - -
Aed10g1805 142 PANTHER DNA BINDING PROTEIN-LIKE 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1805 Aed-Chr10 22585563 22585991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1805 2 70 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 37.681 1.87e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1805 - - gmx:100804756 237.269