Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1803 ATGTGTTCAACAATGACCTTCAACATTCTTCTTTTGCTATCACTTTCACTCACTTCTTGTTGTTTTTCACAGCCTCGCCGTGTTCTCCACCAACCACTGTTTCCGAGAATCTCTGTTCCACCAGCACAAGCTCCTGAGCCTCAACCGAAGAAACAACACCAACAACCCAAGCTTCCGTTTTCTTCTATTTCATCTTCAACACCGCCACCGCCGCAGAAGCCTTTCTTCCCTTCTTATCATTCTCCGCCGCTTCCTCCTCCTCCCCCCGCAGCCGTCGTTGCTGCAACTTTTCCGGCCAACATCTCCTCCCTCCTCCTCCCCCGCCCCGTGTCCCGCCATCACCGCTCCGCCGTCTCCCTCGCCGTCTCACTCTCTCTCTTCTCCCTTGCCCTCCTCGCCGCCGCCGCCGCGTTCCTCCTCCACCACCGCCGCACTCACTCATCCTCTTCCTCCTCCGATGACGACAACGACGACGACAAGGCCTCGAGATCGGACAGCCTCCGCCTGTTCCCGCCGAACACCGCCGCCTCCGACGGCGCCGACCGCAAACCCCGCGGCAAGTCGAGTCCCACATCGGAGCTTCTCTACCTCGGTACGGTGGCGAACTCAGTCACCACCACCACCACAACAACAACAATCACAGACTCAAGCTCCAGCCACCACGAAGGGTTCCGGCCACCGTATCAGAAACTCGGCGACTCGCCGGAGCTCAACCCGCTGCCACCACTACCACGTCACAATTTCAAACCATGGACTAGTGAACAAGACAATGATAATAAATATATAAAAGAAAAGAAAAACGAAGAAGAAAAAGAAACAGAGGAAGAAGAAGAAGAACAGTTTTTTTCCCCAAGAGGTTCTTCTGGTGGGAACATTAACAAACAACAGAGTCCTTCTTCTCCTTCTGCTACTGCTGCTTCAACCTCACGTGTTTTCCACATGAACAAATTCGGTTCCAGAAGCTTCACTTCTCGAACCCCTTCTTACCCTCGTTCAAATTCACACTCTTTTTCGCGTTCCCCTTCTCTGAATTTCAGCCCCGCAAGTGTTAAATCATTGCAACCGAACAACAACCCTGCTTCCCCTTCTTTCTCTTCATCATCTTCATCTCCGAGAGAAGAATGGCACGTTCCATCTCATGGGAAAAATTCTCCGGCGACCACCACTTTACCTCCCCCGCCGCCACCACCTCCGCCTCCTCCGCCGCGGTTCTGGGAAACTCCGGTTGATAGCAAAAGGGTCACTTTTAGGAATGAGAATGAGGAGACTCCGAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCCGACAGGGTCATGGTTTGGGATCGCTTGAGACCCAGTTCTTTTCAGTTGAACGAGGACATGATTGAAACACTTTTTATGGTAAATAATAATAATAATAACAATAATTCGAAGGAGGGTTTTGGTGTTGCGATTAGAGATAATGGTCGGCGTCAAATGGTTCATTCGGCTTCTCCCATGCCCTCGGAGAATAGGGTGCTTGACCCTAAGAAATCACAGAACATTGCCATTTTGCTTAGGGCTCTGAATGTGACTATTGACGAAGTTTGTGACTCTCTCAGGGAAGGCAATTGTGAGACCTTGGGAACAGAACTTCTTGAAAGTTTATTGAAGATGGCCCCAACTAAAGATGAAGAATGTAAGCTGAAGGAGTTTCAAGAAGAATCGCCCTTCAAGCTTGGCCCGGCTGAGAAATTTCTTAAAGTTGTGCTTGATATACCTTTTGCTTTTAAGAGGGTGGATGCTATGCTCTACATTGCTAATTTTGATTCCGAATTAGAATACCTTAAGAAGTCCTTTGAAACTCTGGAGGTGGCCTGTGAGGAATTAAGGAAAAGCGGCATGTTTTTGAAGATACTTGAAGCAGTGCTAAGAACAGGAAATCGAATGAATGTTGGCACCAACCGTGGTGATGCTCATGCCTTCAAACTGGACACGCTTTTGAAGTTAGTTGATATTAAAGGAACTGATGGAAAGACCACTCTCTTGCATTTTGTTGTACAGGAAATTGTCAGAACCGAGGGTTCTCATTTTTCTGGTTCTAATAATAATCACTGTGCCTTTGACAATGGCCACCAATATACTCTTCAAGATGAAGTTGATTTCAAAAAGCTTGGCCTGCAAGTTGTTTCAGGCTTGAGCAGTGAGCTCGCCAATGTTAAAAAAGCAGCTGCTATGGATTCGGACATTCTCAGCAGTGATGTTGCGAAACTTGCCAGAGGAATTGAAAAGGTTGTGCAAGTTGTAAAACTGAACGAGGAGTCGCCTTTGAAAAAAACTAACCAAAAATTTTGGGATGCAATGAAAGGTTTCTTGGAGAGGGGAGAGCAAGAGATTTCAACAATCCAGGCCCAAGAGCAAAATGCCCTCTCTTCAGTAAAGGAGATAACTCGGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCGTCCATTTAGAATTTTCATGGTTGTGAGGGACTTCCTTTCAATATTAGATGGTGTTTGCAAGGAAGTTGGTAAAGTAAATGAGAGGACTATGGTTGGTTCCCGGCAATCTGTAATGCCTGCAAATCCTATAATGCAAACCTTTTTCCCTGAGATTATTGGTAAGCAACCATCTGATTCCTCTGAATCTGATTAA 2658 0.4695 MCSTMTFNILLLLSLSLTSCCFSQPRRVLHQPLFPRISVPPAQAPEPQPKKQHQQPKLPFSSISSSTPPPPQKPFFPSYHSPPLPPPPPAAVVAATFPANISSLLLPRPVSRHHRSAVSLAVSLSLFSLALLAAAAAFLLHHRRTHSSSSSSDDDNDDDKASRSDSLRLFPPNTAASDGADRKPRGKSSPTSELLYLGTVANSVTTTTTTTTITDSSSSHHEGFRPPYQKLGDSPELNPLPPLPRHNFKPWTSEQDNDNKYIKEKKNEEEKETEEEEEEQFFSPRGSSGGNINKQQSPSSPSATAASTSRVFHMNKFGSRSFTSRTPSYPRSNSHSFSRSPSLNFSPASVKSLQPNNNPASPSFSSSSSSPREEWHVPSHGKNSPATTTLPPPPPPPPPPPPRFWETPVDSKRVTFRNENEETPKPKLKALHWDKVKASSDRVMVWDRLRPSSFQLNEDMIETLFMVNNNNNNNNSKEGFGVAIRDNGRRQMVHSASPMPSENRVLDPKKSQNIAILLRALNVTIDEVCDSLREGNCETLGTELLESLLKMAPTKDEECKLKEFQEESPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELRKSGMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHFSGSNNNHCAFDNGHQYTLQDEVDFKKLGLQVVSGLSSELANVKKAAAMDSDILSSDVAKLARGIEKVVQVVKLNEESPLKKTNQKFWDAMKGFLERGEQEISTIQAQEQNALSSVKEITRYFHGNSAKEEARPFRIFMVVRDFLSILDGVCKEVGKVNERTMVGSRQSVMPANPIMQTFFPEIIGKQPSDSSESD 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1803 885 SUPERFAMILY Formin homology 2 domain (FH2 domain) 392 850 - -
Aed10g1803 885 Pfam Formin Homology 2 Domain 420 837 IPR015425 -
Aed10g1803 885 ProSiteProfiles Formin homology-2 (FH2) domain profile. 418 863 IPR015425 -
Aed10g1803 885 PANTHER FORMIN-RELATED 8 882 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed10g1803 885 MobiDBLite consensus disorder prediction 387 406 - -
Aed10g1803 885 MobiDBLite consensus disorder prediction 145 408 - -
Aed10g1803 885 Coils Coil 259 279 - -
Aed10g1803 885 MobiDBLite consensus disorder prediction 39 82 - -
Aed10g1803 885 SMART it6_source 418 852 IPR015425 -
Aed10g1803 885 MobiDBLite consensus disorder prediction 251 270 - -
Aed10g1803 885 MobiDBLite consensus disorder prediction 48 62 - -
Aed10g1803 885 PANTHER FORMIN-LIKE PROTEIN 2 8 882 - -
Aed10g1803 885 MobiDBLite consensus disorder prediction 63 82 - -
Aed10g1803 885 MobiDBLite consensus disorder prediction 192 223 - -
Aed10g1803 885 Gene3D Formin, FH2 domain 413 848 IPR042201 -
Aed10g1803 885 MobiDBLite consensus disorder prediction 146 165 - -
Aed10g1803 885 MobiDBLite consensus disorder prediction 284 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1803 Aed-Chr10 22567479 22572923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1803 381 877 FH2 protein (formin) Gene Family AT3G25500 61.252 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1803 - - gmx:100786203 1266.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1803 10 22567479 22572923 Aed10g1803 10 22567479 22572923 ECH