Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1772 AATAACCCCAAATACTCATTTGGGTTGGTGACCCTTCACGGGGTGAAACCATTTCTGGTCTCTTTCTTCACCCACCAACTCTACATCCACTGGTTCACGCGGAACCACGTCAATCTGAACCGGCCTTTCGCTTGTTGCTGGGGTGCTGCAAAAAAAAAAAAAAAACGGCAAAGGATCATGAGTGTTGGGCCCGGAATGGATTTGCCGATCATGCATGACAGTGATCGCTATGAGCTTGTGCGTGACATTGGCTCTGGCAACTTCGGTGTAGCCAGGCTCATGAGGGACAAGCACACCGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGTCCTCAGTTCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATATATCGCTCCTGAGGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGAAAGACAATACATAGGATTTTAAATGTTCAGTACTCAATTCCTGACTACGTTCATATATCTCCCGAGTGCCAACATCTTATATCAAGGATTTTTGTTGCTGATCCTGCAAAGAGAATAAGTATTCCTGAGATCAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAAGTGATCTCATGGAAGATGGAAATACCAACAACCAGTTTGAGGAGGCTGCAGATCAGCCAATGCAAAGCATAGAAGAAATAATGCAGATAATAAAAGAGGCTACAATTCCTGCAGCTGGATCTCAGTCACTCAACCATGATCTTACTGGTAGCTTGGATATTGATGATGATGACATGGATTCAGATCCTGACCTTGACTTAGATAGCAGTGGAGAAATTGTGTATGCTATGTAA 924 0.4329 NNPKYSFGLVTLHGVKPFLVSFFTHQLYIHWFTRNHVNLNRPFACCWGAAKKKKKRQRIMSVGPGMDLPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECQHLISRIFVADPAKRISIPEIRNHEWFLKNLPSDLMEDGNTNNQFEEAADQPMQSIEEIMQIIKEATIPAAGSQSLNHDLTGSLDIDDDDMDSDPDLDLDSSGEIVYAM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1772 307 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 67 113 - -
Aed10g1772 307 PANTHER SERINE/THREONINE KINASE 113 302 - -
Aed10g1772 307 SUPERFAMILY Protein kinase-like (PK-like) 69 233 IPR011009 -
Aed10g1772 307 Gene3D Phosphorylase Kinase; domain 1 51 116 - -
Aed10g1772 307 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1772 307 MobiDBLite consensus disorder prediction 283 297 - -
Aed10g1772 307 MobiDBLite consensus disorder prediction 277 307 - -
Aed10g1772 307 PANTHER SERINE/THREONINE KINASE 67 113 - -
Aed10g1772 307 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 113 302 - -
Aed10g1772 307 Pfam Protein kinase domain 119 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1772 307 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Aed10g1772 307 SMART serkin_6 77 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1772 307 Gene3D Transferase(Phosphotransferase) domain 1 117 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1772 Aed-Chr10 22248003 22251658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1772 116 231 CBL-interacting serine-threonine protein kinases AT5G25110 48.276 3.34e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed10g1772 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1772 K14498 - gmx:100796253 352.058