Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed10g1769 | ATGATCACTAATTGTAGAGTTGTCATGATCTACTTCACTTTCTTCTTCTTGGTTCCTTTTGTTCATAGTAATAACCAGCTTGAGACCAGTTTCTATGATGGTTCATGCCCCAATTTGACCACGATTGTTAGATATGGTATTTGGTCAGCCATACAAAATGATAATAGAATGGCTGCGTCTCTCCTTCGTTTGCACTTTCACGATTGCATAGTAAATGTTGGAGGACCTTCTTGGTCTGTTGCATTTGGCCGAAGAGATGCAACAACAGCCAATAGGATGGAAGCTAATCAACAAATTCCCTCACCGTTCGAACCTCTAGATAACATCATTGCAAAGTTTGCTTCAAAGGGTCTTAACTTGAGGGATCTTGTAGCCCTTTCAGGAGCACATACAATTGGCTATGCTCGATGCTTAACCTTCAAAAGGAGACTCTTTGACTTCCAAGGCTCAGGCAGACCTGATCCGGTGCTTGCATCTTCACTTCTCCCAAAACTGCAAAGCACGTGTCCAGATAGACTAGACACTAATTCAAACACCTTCATTGCGCCTCTTGATGCTAACACCACTTTGACATTCGACAATGAGTATTACAGAAACCTCGTCTACAACAGAGGGCTTCTGGAATCTGACCAAGCACTGCTTGCGGATCGAAGGACTGCTTCTATGGCTTATTCTTACAGCACCGACCAATATTCATTCTATAACGACTTTGCTGCTTCCATGATTGGAGGGCCTTTTTGGCCTGTTCAATTGGGCAGAAGAGATGCAACAACAACCACTAAGGAGGCAGCTGAGCAACAACTTCCCTCACCAATTGAGCCTCTAGACAACATCACTGCAAAGTTTTTCTCCAAGGGTTTTAACTTGAAGGATGTTGTAGCCCTTTCAGGAGCACATACAATTGGTTTTGCAAGATGCTTCACCTTCAAAGGGAGACTTTTTGACTTCCAAGGCTCTGGCAGACCTGATCCCTCTCTTGAATTTTCACTTCTCTCAAAACTGCAAGACACGTGTCCAAATGAAGACGCCTCAAACAGCAACCTAGCACCTCTTGATGCTACAAGTACAGCCATGTTTGACAATGAGTATTATAGAAACATCTTATACAACACAGCTCTTCTAGAATCTGACCAAGCACTAATCAAGGATCGAAGGACTGCTCCTATGGTTAATGATTACAGCAACAACCGGTTCTCCTTCTACCGTGATTTTGCTGCATCCATGGTGAAGCTCACTAATGTTGGAGTGCTTACAGGAACACAAGGCCAAATTAGATATAAATGTGGCTCAGTAAACAACTACTAA | 1305 | 0.4299 | MITNCRVVMIYFTFFFLVPFVHSNNQLETSFYDGSCPNLTTIVRYGIWSAIQNDNRMAASLLRLHFHDCIVNVGGPSWSVAFGRRDATTANRMEANQQIPSPFEPLDNIIAKFASKGLNLRDLVALSGAHTIGYARCLTFKRRLFDFQGSGRPDPVLASSLLPKLQSTCPDRLDTNSNTFIAPLDANTTLTFDNEYYRNLVYNRGLLESDQALLADRRTASMAYSYSTDQYSFYNDFAASMIGGPFWPVQLGRRDATTTTKEAAEQQLPSPIEPLDNITAKFFSKGFNLKDVVALSGAHTIGFARCFTFKGRLFDFQGSGRPDPSLEFSLLSKLQDTCPNEDASNSNLAPLDATSTAMFDNEYYRNILYNTALLESDQALIKDRRTAPMVNDYSNNRFSFYRDFAASMVKLTNVGVLTGTQGQIRYKCGSVNNY | 434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed10g1769 | 434 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PRINTS | Haem peroxidase superfamily signature | 118 | 135 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 432 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | SUPERFAMILY | Heme-dependent peroxidases | 239 | 432 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 291 | 301 | IPR019793 | - | |
| Aed10g1769 | 434 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 122 | 132 | IPR019793 | - | |
| Aed10g1769 | 434 | PANTHER | PEROXIDASE 10 | 241 | 431 | - | - | |
| Aed10g1769 | 434 | ProSitePatterns | Peroxidases active site signature. | 58 | 69 | IPR019794 | GO:0004601 | |
| Aed10g1769 | 434 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | Gene3D | Peroxidase, domain 2 | 100 | 243 | - | - | |
| Aed10g1769 | 434 | Gene3D | Peroxidase, domain 2 | 269 | 411 | - | - | |
| Aed10g1769 | 434 | Gene3D | - | 27 | 73 | - | - | |
| Aed10g1769 | 434 | SUPERFAMILY | Heme-dependent peroxidases | 26 | 242 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PANTHER | PEROXIDASE 10 | 71 | 242 | - | - | |
| Aed10g1769 | 434 | PANTHER | PEROXIDASE 10 | 12 | 72 | - | - | |
| Aed10g1769 | 434 | Pfam | Peroxidase | 71 | 228 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | Pfam | Peroxidase | 238 | 396 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PANTHER | PEROXIDASE 72-RELATED | 241 | 431 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PANTHER | PEROXIDASE 72-RELATED | 71 | 242 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Aed10g1769 | 434 | PANTHER | PEROXIDASE 72-RELATED | 12 | 72 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed10g1769 | Aed-Chr10 | 22202679 | 22208383 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed10g1769 | 238 | 429 | Peroxidase | AT1G49570 | 60.309 | 2.13e-77 | 243 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed10g1769 | K00430 | - | gmx:100805171 | 338.576 |