Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1766 ATGGGGGTTTGCACTTCGAAGCCGCAGAAGCCGAACCCTTACGCGCTTCGCGAAGCCGAAGCAGCCGACCCTTCGCGAATCCCAAAAACCCCACTCAGTCCCAACACCGCCGCCGACACCCCTCGCCGGAAAGATGACGTCAGTGCCGGAAAACGGTCGCCGTTCTTCCCCTTCTACAGCCCGAGTCCAGCTCGCTTCCTGAAGAAGTCTCCGGCGCCGGCGGGAGGGAGCCGGAGCGCGAGCTCCACGCCGAGGAGATTCTTCCGGCGACCTTTCCCGCCGCCGTCGCCGGCGAAGCACATAAGGGCGGTGCTGGCGCGGCGGCAGGGGAAGAAGTCGTCGGCGGCGGCTACGGCGGCGATACCGGAGGAGGGGGAGGAGGGTGCGGCGAATTTGGATAAGAGGTTTGGGTTCTCTAAGGAGTTCACTAGTAGGTTGGAGGTTGGTGAAGAAGTGGGTCGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTCAAGAAGGGTGAGCTCAAGGGTCAACAAGTAGCTGTTAAGGTCATACCAAAAGAAAAGATGACAACAGCAATTGCTATTGAAGATGTGAGAAGGGAAGTGAAAATACTGCGAGCTTTGAATGGACACAGCAATTTGATACAGTTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGGGAGCTCTTAGATATGATATTATCAAGAGGAGGGAAATACTCTGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTTTCATTTTGTCATCTTCAGGGTGTGGTACACCGCGATCTTAAGCCAGAGAACTTTTTGTATGCTAAAAAGGATGAAAGTTCTGAGTTGAAAGCTATTGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGACTTAACGATATTGTTGGAAGTGCATACTATGTGGCCCCTGAAGTTCTCCATAGATCTTATAGCACAGAGGCAGATGTGTGGAGTATAGGTGTAATAGCATATATTCTATTATGTGGTAGTCGCCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCAAGCTTTGACGAAACACCATGGCCATCTTTATCTTTAGAAGCTAAGGATTTTGTCAAACGGTTATTGAATAAGGATCCACGGAAGCGCATATCTGCCGCCCAGGCTCTAAGTCATCCTTGGATACGAAATTACAGTAATGTAAAAGTTCCACTTGATATTTTAATATTTAAGCTTATGAAGACATATATGAGATCATCATCCTTACGCAAGGCTGCCTTAAGGGCCTTGTCAAAAACATTGACTACAGATGAACTCTATTATCTGAGGGAGCAATTTGCATTGCTAGAACCAAGCAAAAATGGCAGCATATCTTTAGAGAACGTTAACAAGGCCTTGGTGAAATATGCAACAGATGCCATGAAAGAGTCTCGCATCCCTGACTTCCTTTCATCGCTGAATTCATTGCAATATAGAAGGATGGATTTTGAAGAATTTTGTGCAGCTGCATTAAGTGTGCATCAACTTGAAGCTCTTGATCGCTGGGAACAACATGCCCGCTGTGCGTATGAACTTTTTGATAAAGACGGAAACAGGGCTATTGTCATTGAAGAGCTTGCTTCCGAACTTGGACTTGGTCCCTCTATCCCTGTTCATGTTGTTCTTCATGATTGGATACGCCACACTGATGGGAAGTTAAGCTTTCTTGGGTTTGTCAAACTATTACACGGTGTATCTAGCCGAAGCCTTGCAAAGGTTCAATGA 1803 0.4659 MGVCTSKPQKPNPYALREAEAADPSRIPKTPLSPNTAADTPRRKDDVSAGKRSPFFPFYSPSPARFLKKSPAPAGGSRSASSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKSSAAATAAIPEEGEEGAANLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGELKGQQVAVKVIPKEKMTTAIAIEDVRREVKILRALNGHSNLIQFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVSFCHLQGVVHRDLKPENFLYAKKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDETPWPSLSLEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYSNVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTTDELYYLREQFALLEPSKNGSISLENVNKALVKYATDAMKESRIPDFLSSLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFDKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1766 600 ProSiteProfiles Protein kinase domain profile. 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1766 600 CDD STKc_CAMK 147 407 - -
Aed10g1766 600 PANTHER CDPK-RELATED KINASE 2 41 594 - -
Aed10g1766 600 Gene3D - 433 587 - -
Aed10g1766 600 SUPERFAMILY Protein kinase-like (PK-like) 142 446 IPR011009 -
Aed10g1766 600 Pfam Protein kinase domain 147 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1766 600 SUPERFAMILY EF-hand 436 590 IPR011992 -
Aed10g1766 600 ProSitePatterns Protein kinases ATP-binding region signature. 152 178 IPR017441 GO:0005524
Aed10g1766 600 Gene3D - 426 517 - -
Aed10g1766 600 SMART serkin_6 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1766 600 Gene3D Transferase(Phosphotransferase) domain 1 235 420 - -
Aed10g1766 600 MobiDBLite consensus disorder prediction 1 98 - -
Aed10g1766 600 Gene3D Phosphorylase Kinase; domain 1 148 234 - -
Aed10g1766 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 594 - -
Aed10g1766 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1766 Aed-Chr10 22167401 22172237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1766 1 596 EF-hand Containing Proteins AT3G50530 71.632 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed10g1766 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1766 - K00924 gmx:100798913 1087.79