Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1740 ATGTCACAATCCTATCTGTCAACCTTCTGGATTCACTCCCATTCACTACTCCCACCCCACGTGATCAAATTATATAAAAATCCAAACTCCGTGTGTGAACGGTGTGCCAGTTGGACCTTACCCCGCCACGTCACCTCCAAATCGTATATAAACCATCCACCCCCTGACCTTACACTTAGGTTCACTTCGAAAATAAACTTCAACGCGCCAAACCCAAGAGACCTTCAACAACAACAACACTACAGAGTTTTCATTCTCTTGAAAGTTACAATGTTCTCCCCCGCCACTCTCACCACCGAGAATGAATTCTCCATCATCGTCGACGCCCTCACCAAAGTCGTCACAGGCTCCACCTCCACCACCATCCCGGAGTACCGCCTCCCGCAGACCTCCGAGCCTTTCTCCGCCGCCGCAGCCAGCCTAATCCCGCCGCCGCCGAGCATGGACACGTGTCGCGAATGCAACATAGCGGGATGCTTGGGATGCAACTTTTTCCCGGAGGAGAAAAAGAAGCAGAAGAGGGCGAAGAAGAAGTACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCCGCGGAGATTCGCGACCCGCGCCGTGCGACCCGGGTCTGGCTTGGCACGTTCACCACCGCCGAGGAAGCCGCCCGGGCCTACGACAAGGCCGCGACCGAGTTCCGCGGCCCACGGGCCAAGCTCAATTTTCCCCTGGTCGACGAGTCGCTCACTATGCAGCAGCAGCAGAGCGAGCCTGCAGAGAGGATTCAAACGGAAGAAGAGCAAATAATAAAGAGCGAGAATCTGAATCAAGGTATGGAAATGGGTTCGCACCACGAATTCGGGAACAACAAGGACACCGAATTCTGGGACAGTATTTGCGATGCTGATTTTCATCAGCTTCACCGCATGATCATGATGGATTTTGCTGGAGATTCTTCCGACTCTGCCGCCACTGGGAACACTCTCAGTTCCTGA 972 0.5422 MSQSYLSTFWIHSHSLLPPHVIKLYKNPNSVCERCASWTLPRHVTSKSYINHPPPDLTLRFTSKINFNAPNPRDLQQQQHYRVFILLKVTMFSPATLTTENEFSIIVDALTKVVTGSTSTTIPEYRLPQTSEPFSAAAASLIPPPPSMDTCRECNIAGCLGCNFFPEEKKKQKRAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFTTAEEAARAYDKAATEFRGPRAKLNFPLVDESLTMQQQQSEPAERIQTEEEQIIKSENLNQGMEMGSHHEFGNNKDTEFWDSICDADFHQLHRMIMMDFAGDSSDSAATGNTLSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1740 323 ProSiteProfiles AP2/ERF domain profile. 178 235 IPR001471 GO:0003700|GO:0006355
Aed10g1740 323 CDD AP2 179 235 IPR001471 GO:0003700|GO:0006355
Aed10g1740 323 Gene3D AP2/ERF domain 177 237 IPR036955 GO:0003700|GO:0006355
Aed10g1740 323 SUPERFAMILY DNA-binding domain 178 236 IPR016177 GO:0003677
Aed10g1740 323 Pfam AP2 domain 178 227 IPR001471 GO:0003700|GO:0006355
Aed10g1740 323 PRINTS Ethylene responsive element binding protein signature 179 190 IPR001471 GO:0003700|GO:0006355
Aed10g1740 323 PRINTS Ethylene responsive element binding protein signature 201 217 IPR001471 GO:0003700|GO:0006355
Aed10g1740 323 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 92 314 - -
Aed10g1740 323 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 92 314 - -
Aed10g1740 323 SMART rav1_2 178 241 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1740 Aed-Chr10 22015508 22016479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1740 90 238 AP2-EREBP Transcription Factor Family AT4G34410 47.568 1.91e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed10g1740 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1740 - - gmx:100820426 347.436