Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1724 ATGCTCTACTGGCTTGCATCTTTGTTGGGTTTGTTGGCTTTTCTTGGAATGCAGCAGCTTCCTGTCATAGTGGCTGATTGCCCTTTGAATTTTACTGGTTCAAACTTCACACTGGCTTCCTCTCTATGTTCTAACCACGGTGACCGGGGAAAATGTTGCCGTTACATTAATACAAACGTTGCAATTTCTGTTGCTCGTTTTGCTAATGCAACAGGCAACCTAGGGGTCCCTCAAACTGCGTCTGACATCTGCCTCCAAACCATATTTCAAACCTTGCAACTTAATGGAGTTGCACCGAATGCAACAGCTTTCTGTGGTTTTGGGACAAAAATTCCTGTTAATTATGAATGCAAGGGGAGAACTAGTGTTGTCCAAATGCTGCAATCCCCCAGATTTACGGAGGTCATAAAAAATTGCAAAGCACCACTTAGAGAGGAAAGCAAATGTAAGAAGTGCTTAAATGCTGGCTTTGGTTATCTGCATCATATCGAAATTGAAGATAATATAACACTGAGTACATGTCGTGATGCCACTTTTGCTGCTCTAGCAAGCCAAGTTGATGAGATATCTATTATTGACATTGCAATTTGTTTCTTTGGGGTTCAAGGACTTCTCATACCTCCTGTGTCATCCCCATCCTTGCCTTCTCCTAAGGCTTCTCCAAGCCCCCCACGGGTTGCTGATGGCCCAAGCTCTTCATCTATGTTCCGAAAATTCAACTACAAGGAGATAAAAAAGGCTACAGAGGATTTTAGCACTGTCATTGGCCAAGGGGGATTTGGAACTGTGTATAAAGCTCAATTTTCTGATGGCCTCATTGTAGCAGTAAAAAGGATGAACAGAATCTCTGAGCAGGGGGAGGATGAGTTCTGCAGAGAAATTGAACTTCTTGCACGGCTGCACCATCGGCATCTTGTTGCTTTAAGAGGATTTTGCATTAAAAACGTGAGAGCCCCTGGTAAAACACCTTTAAGTTGGCGAACTAGAATCCAAATTGCCATTGATATCGCCAATGCACTGGAGTACCTCCATTTCTATTGTGATCCTCCTTTGTGTCACCGAGATATTAAATCTAGCAACACTTTACTGGATGAAAATTTTCTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAGGATGGCTCAGTATGCTTTGAACCTGTAAACACCGAAATCCGGGGAACTCCAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTTATCTCTATAGTAGCATGGTGCACCCAAAGAGAAGGAAGGGCAAGGCCTTCAATTAAACAGGTACTTAGGCTTCTGTATGAGACATCAGAACCAATGCACAGTGAGTTTCTACAAGCTGTTGAGGATGAAGAAGGTCAAGGAAGTCAGCATAGAGGCAGAAGAAGCAAGGGGAAAATGCTTAGAAATGAGGCATTGTTTCACAGTGGAGATGGAAGATATCTTGCTTCATCTTCAAGTACATCTCGGTCGTACTGCAGTAGAACCTTTTTACTTGAGAGTGGCTCTCCACAGTCTCCGCCAAATATGTTCTCTCTCTGA 1560 0.4327 MLYWLASLLGLLAFLGMQQLPVIVADCPLNFTGSNFTLASSLCSNHGDRGKCCRYINTNVAISVARFANATGNLGVPQTASDICLQTIFQTLQLNGVAPNATAFCGFGTKIPVNYECKGRTSVVQMLQSPRFTEVIKNCKAPLREESKCKKCLNAGFGYLHHIEIEDNITLSTCRDATFAALASQVDEISIIDIAICFFGVQGLLIPPVSSPSLPSPKASPSPPRVADGPSSSSMFRKFNYKEIKKATEDFSTVIGQGGFGTVYKAQFSDGLIVAVKRMNRISEQGEDEFCREIELLARLHHRHLVALRGFCIKNVRAPGKTPLSWRTRIQIAIDIANALEYLHFYCDPPLCHRDIKSSNTLLDENFLAKIADFGLAQASKDGSVCFEPVNTEIRGTPDPNVRESFDLDQLQTVISIVAWCTQREGRARPSIKQVLRLLYETSEPMHSEFLQAVEDEEGQGSQHRGRRSKGKMLRNEALFHSGDGRYLASSSSTSRSYCSRTFLLESGSPQSPPNMFSL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1724 519 PANTHER BNAC06G02630D PROTEIN 3 231 - -
Aed10g1724 519 PANTHER BNAC06G02630D PROTEIN 399 519 - -
Aed10g1724 519 PANTHER BNAC06G02630D PROTEIN 231 398 - -
Aed10g1724 519 MobiDBLite consensus disorder prediction 212 233 - -
Aed10g1724 519 Pfam SPARK 26 163 IPR043891 -
Aed10g1724 519 SMART serkin_6 249 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1724 519 PANTHER OS01G0750732 PROTEIN 399 519 - -
Aed10g1724 519 PANTHER OS01G0750732 PROTEIN 231 398 - -
Aed10g1724 519 Gene3D Phosphorylase Kinase; domain 1 225 315 - -
Aed10g1724 519 MobiDBLite consensus disorder prediction 454 474 - -
Aed10g1724 519 PANTHER OS01G0750732 PROTEIN 3 231 - -
Aed10g1724 519 Gene3D Transferase(Phosphotransferase) domain 1 316 399 - -
Aed10g1724 519 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Aed10g1724 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Aed10g1724 519 Pfam Protein kinase domain 325 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1724 519 Pfam Protein kinase domain 253 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1724 519 ProSiteProfiles Protein kinase domain profile. 249 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1724 519 SUPERFAMILY Protein kinase-like (PK-like) 228 441 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1724 Aed-Chr10 21884986 21890126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1724 218 519 Receptor kinase-like Gene Family AT3G19300 53.141 2.53e-118 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Aed10g1724 SPARK 5.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1724 - - qlo:115968238 404.445