Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1720 ATTATACTTTGTAACCTATATATAAATGTATCTTTCTGTACTTTTTCAGTTCTCAAATTTAACTTTTTGTATTTCTCTTTCTCTCTCACACACTTTATCATGGCCTTGACTATAGAAGATGAAGGTTTGAATGATATGAGCTTCTTATGGAAAAACCATTCATGGGATCTCTTCGATTCAGATAATTCAGATGAAAATAAGGAAAATATGAAGTCATTAGATCAGAAAGAAGAAGAAGATGAAATTCTCGTAAATAAGAAGCGAAATCGAGGCGATAACAATATTACTAGTGGTGAAGGAAAAAAAGAAAAGTGTCATGAATCTGAACATGAATTTCACATATGGACTGAGAGAGAAAGGAGAAAGAAAATGAGAAATATGTTCGAAAGTCTTCATACTTTACTTCCAGATCTTCCATCTAAGCTTGAGCAAACCCTCGAAAAGTTGGAGAAACGGAAGCAAGAAATGGCTCAATGTGTCTCCACTTTTGGGTCTGAGACATCTATGTTTGTCACTGGTCCAACTCAGGGATCTTCTGTTTCTAACAACTTTTCCAATACAAATATGGGATTGGGAACTACTGCTACTATTACTACTTCAAATGCACTTTCATTCCCTGGGCCTGGACCCCAGCAAGAAGTTGTGGCTTTTAACCAAACTTGGGTCTCTCCAAATGTGGTCCTGAACATTTGTGGAGATGAGGCCCAATTCTCAATTTACGCGGCCCGTAAGCCCGGACTCATCACCAGCATTGCTTTCGTGCTCGAGAAGTACAAGATTGATGTCACAACTGCCTACATCTTGTGCATTGGTAATGGAAATGCTTGCATGATTCTAGCCCATGGAAAAAGAGCTTCAAATGAGTTCCTGGATGCAAATTCATTGGAGGAGATTTACAAGCAAGCAGCGGGAGAGATGATTATGTGGATCGCTTGA 936 0.3868 IILCNLYINVSFCTFSVLKFNFLYFSFSLTHFIMALTIEDEGLNDMSFLWKNHSWDLFDSDNSDENKENMKSLDQKEEEDEILVNKKRNRGDNNITSGEGKKEKCHESEHEFHIWTERERRKKMRNMFESLHTLLPDLPSKLEQTLEKLEKRKQEMAQCVSTFGSETSMFVTGPTQGSSVSNNFSNTNMGLGTTATITTSNALSFPGPGPQQEVVAFNQTWVSPNVVLNICGDEAQFSIYAARKPGLITSIAFVLEKYKIDVTTAYILCIGNGNACMILAHGKRASNEFLDANSLEEIYKQAAGEMIMWIA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1720 311 CDD bHLH_AtbHLH_like 113 136 IPR045239 -
Aed10g1720 311 MobiDBLite consensus disorder prediction 63 103 - -
Aed10g1720 311 PANTHER TRANSCRIPTION FACTOR BHLH95 45 309 - -
Aed10g1720 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 110 151 IPR036638 GO:0046983
Aed10g1720 311 PANTHER - 45 309 IPR044278 GO:0003700|GO:0006355|GO:0009960
Aed10g1720 311 Gene3D - 99 162 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1720 Aed-Chr10 21848728 21850442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1720 96 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 35.115 4.33e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed10g1720 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1720 - - gmx:102665879 368.237