Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1718 ATGGTCTTGACTATAGAAGATCAATGTTTGAATGATGAGTTTTTTTGGAAAAATCATTTGTGGGATCTCTTCAATTTTAATAATTCGGGTGAAATTGTGGATGAAGCAGTGAGGTACATCAAAAAGCTTGAGCAAACCCTTGAAAAGCTGGAGAAACAGAAGCAAGAAAGGGCCCAATGTGTCTCCACTTTTGGGTCTGAGACATCTATGTTTGTCACTGATCAGGGATCTTCTATTTGCAATAATAACAACATTTCCAATGCAAATATGGGATTGGGAACTACTACTACTATTACTACTTCAAATGCACTTTCATTCCCTGGGCCTGGGCCCCAGCAAAAAGTTGTGACTTTTAACCAAACTTGGGTCTCTCCAAATGTGGTCCTGAATATTTGTGGAGATGAGGCCCAATTCTCCGTTTATGCGGCCCGCAAGCCCGGACTCATCACCAGCATTGCTTTCGTGCTCGAGAAGTACAAGATAGAGGGAAAACGAGTTTCAAATCAGTTCCTGGATGCAAGTTTATTGGAGGAAATTTACAAGCAAGCAGCGGGAGAGATTATACGGTGGACTGCTTAA 579 0.4162 MVLTIEDQCLNDEFFWKNHLWDLFNFNNSGEIVDEAVRYIKKLEQTLEKLEKQKQERAQCVSTFGSETSMFVTDQGSSICNNNNISNANMGLGTTTTITTSNALSFPGPGPQQKVVTFNQTWVSPNVVLNICGDEAQFSVYAARKPGLITSIAFVLEKYKIEGKRVSNQFLDASLLEEIYKQAAGEIIRWTA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1718 192 PANTHER TRANSCRIPTION FACTOR BHLH95 31 162 - -
Aed10g1718 192 Coils Coil 33 63 - -
Aed10g1718 192 PANTHER - 31 162 IPR044278 GO:0003700|GO:0006355|GO:0009960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1718 Aed-Chr10 21836243 21838119 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1718 32 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 36.242 7.42e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1718 - - gmx:102665879 168.318