Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1717 ATGCAAGGTCAAAGGAGGACTGTTGGATCATTCCCAGCAATTGTTAGTATGATGCAAGGGCCTAGTTCTGGTGGCACTGATATGAATCAGCAGTCTTCCTTGAATCATGTGCAAAATGCAGTTGATTTCCGGTTGTCAGATTATAGGGGATCTTCTGGTGAGGCTGCATGTTTGCGTGGTACTAGTCATAATGTTCAGAGCTTCAGTGGCTGGAACACTGGTGAATCTAGTTCTAGACTGAATCTGATCAACCAAGTCGATGATGAAGGTCTAAAATCAGCACATGGGCTGTCTTCTTTGTGTAATGCTACTACCGAGGATGGTCTCAGGTCTGAGGAAAGACAATTTGAACCAAATAATTTAATTTTTCCTATTAGTTCAAATACTAATATACATGGCAATCAATCTAGAGTCCACCCTTCCTTTTTGCAAGGTTCCGGTTCTACTCATATTAGCCAGAATATTAGTCTAGATATGGGGCATGCTGCTAATGCTGCTGATCGTGGGAAGGGCAAAGAAGCTGGTAGTAGTGTTAATGCCAACAATACTAGTGGAATAGATAGAGAAAAGACATTGTTTGGCAGTGCTCCATGTAATCACATAGGAGCTTCATCTGAAAGCTCTGGATATATGGCTTGGGGTGATAGTTCTAGTTCAAGTTCTTCTTTAGTTAATTGGGGTCCTTCGTGTAAGAGAAAGGCTCTTGAAGGTAGTTCTAGGCAACTGTGCTCTGGAGGAAGCTCAAGCACTCTTGTACAATCTGAAAATGGTTGCTGGCCTACTGATCCTGTTGATCTTAATGCTTCTAGCATCGTAAGTGATTCTACACCTATAGAAGATATTCCTGTTACTAGTCCTCCATTATTTCAGAATGCAAGAAATGAAGTGAGACAAGAAGCTTCCAGTGCATTTCCTTTGATAAGTATTGCAGAAAATGCAGAAAGGCCTTTAAGAAACTTCAATCGAAGAATGAGCCAACTACAGCATCAGGAATCTGTACCTCTCAATTTACCCTCAACAGGGAGTGCTAGGCATCATCATCATCACCAACATCATTCTTCTCTGCATCAAATACCCGGCTCTCACTCAATCAATGATTCATTGGAATTGAGGTTAACAGCTGGAGGAGTAACAACTGCTAATTCTGGTGCTGCTCTGAACCAGTCACCTGCCATGCGCATCCATTCTTTTCCTTGGAACAGAACTGCCAATCCTAGAGGGTCCAGATCTTCAGCTTCTTATAACACTGGAGAAAGAGCTGTCCGGGAAGATTTTAATTTGAGAATGTTTCCAAGAGATAATACTGAGCACCCCATGAATGTGCCTGCATCTTCAGGACATGAACCTACAGGTTGGCATACCCCATCTGGTAATGTGAACAATTCTGGAGTTGTACCTCCTCCACCCTGGATTGGATCGAGTTCAAGTGTCCACTCTTCGCCTAACCCTAGCTGGATTTTTAATCATGACGTCCCAGCAGAAAATATGCAGACTGTGTCAGAGTTCAGTCCTTGGTCCCTTTTTCCATCAATTAGCACTTCATCTGGTGTTCATAATGGCCATTCTACCCCACCATCTTCTTCTGGTCCTCCATTTACCCAGGGTTCTAGCAGCAACCAACCATTTGTAAGAACAGCATCGTTGATGGAAAGAAGGGGCGGTGATGTCCTCCCTGCTGGTCCCCATTCACTGCGAGCATTAACCTTTGACAACGAGGGGAGACGTCGACTAATATCTGAGATTCGCCAAGTCTTGATGGCAATGCGGAGGGGTGAGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCTTTCCTGTATCATGGCATGGCTGAAATGCATGACAGGCACCGAGAAATGCGCCTCGATGTCGACAACATGTCTTACGAGGAATTGCTGGCATTGGGGGAGCGCATAGGAGATGTGAGCACTGGATTGAGTGAGGATGTCATTATTAAGTTGATGAAACAGCGAATTTACATGCGTGTCATGACAGAAGATTGTTAG 2007 0.4395 MQGQRRTVGSFPAIVSMMQGPSSGGTDMNQQSSLNHVQNAVDFRLSDYRGSSGEAACLRGTSHNVQSFSGWNTGESSSRLNLINQVDDEGLKSAHGLSSLCNATTEDGLRSEERQFEPNNLIFPISSNTNIHGNQSRVHPSFLQGSGSTHISQNISLDMGHAANAADRGKGKEAGSSVNANNTSGIDREKTLFGSAPCNHIGASSESSGYMAWGDSSSSSSSLVNWGPSCKRKALEGSSRQLCSGGSSSTLVQSENGCWPTDPVDLNASSIVSDSTPIEDIPVTSPPLFQNARNEVRQEASSAFPLISIAENAERPLRNFNRRMSQLQHQESVPLNLPSTGSARHHHHHQHHSSLHQIPGSHSINDSLELRLTAGGVTTANSGAALNQSPAMRIHSFPWNRTANPRGSRSSASYNTGERAVREDFNLRMFPRDNTEHPMNVPASSGHEPTGWHTPSGNVNNSGVVPPPPWIGSSSSVHSSPNPSWIFNHDVPAENMQTVSEFSPWSLFPSISTSSGVHNGHSTPPSSSGPPFTQGSSSNQPFVRTASLMERRGGDVLPAGPHSLRALTFDNEGRRRLISEIRQVLMAMRRGENLRAEDYMLFDPFLYHGMAEMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEDVIIKLMKQRIYMRVMTEDC 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1717 668 MobiDBLite consensus disorder prediction 326 362 - -
Aed10g1717 668 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 666 IPR045191 GO:0061630
Aed10g1717 668 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 666 - -
Aed10g1717 668 MobiDBLite consensus disorder prediction 440 462 - -
Aed10g1717 668 MobiDBLite consensus disorder prediction 514 540 - -
Aed10g1717 668 MobiDBLite consensus disorder prediction 447 462 - -
Aed10g1717 668 MobiDBLite consensus disorder prediction 164 188 - -
Aed10g1717 668 Coils Coil 310 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1717 Aed-Chr10 21823336 21830278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1717 18 657 C3H Transcription Factor Family AT2G15530 36.524 1.75e-83 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1717 - K19041 gmx:100809024 1142.87