Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1716 ATGGAACAAAACCATATGGGGTCTATTATTAAGTGGAGAGAGAAACCTCACCAACTCCGGACCGGACGCCAAGCGGTTCAACCAAACACCACACCGGTTCAAAACGGCCCTTTTTTTCTCCCTTATATTAACCACCTTCCTTACACCATCCACTTCATCAAGCTCTTCGAAAGGGAGAAAAAACAAAGAAGAAGAAAAGGAAACAAAACTCACAAGGATTTTATTACAGCAATGGCAGAACAAAACCAAACAACCGAAGTTTCAAGGCACCAAGAGGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTTTACCAGTATATTCTGGAGACCAGTGTCTACCCAAGAGAACCTGAAGCCATGAAAGAATTAAGAGAGTTGACAGCAAAACACCCATGGAACATCATGACAACTTCTGCAGACGAAGGACAGTTCTTGAACATGCTCCTTAAGCTTATAAATGCAAAGAACACCATGGAAATCGGTGTCTACACTGGGTATTCACTTCTTGCTACCGCTCTCGCTCTCCCTGAAGATGGAAAGATCTTGGCCATGGACATTAACAGGGAGAATTACGAACTGGGTTTGCCTGTGATTAAGAAAGCTGGCGTTGAACACAAAATTGAATTCAGAGAAGGCCCTGCTCTCCCCGTGCTCGACGAAATGATTAAAGACAACCATGGGAGCTACGATTTCATCTTTGTGGATGCGGACAAGGACAACTACATCAACTACCACAAGAGGTTGATAGATCTCGTCAAAGTTGGGGGCGTGATCGGGTACGATAACACTCTATGGAACGGCTCTGTGGTGGCACCGCCTGATGCGCCTCTCAGGAAGTACGTTAGGTACTACAGGGACTTCGTGCTGGAGCTCAACAAGGCGCTCGCTGCTGACCCCAGGATCGAAATCTGCATGCTACCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAAGTGA 963 0.4673 MEQNHMGSIIKWREKPHQLRTGRQAVQPNTTPVQNGPFFLPYINHLPYTIHFIKLFEREKKQRRRKGNKTHKDFITAMAEQNQTTEVSRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIKKAGVEHKIEFREGPALPVLDEMIKDNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1716 320 Pfam O-methyltransferase 110 319 IPR002935 GO:0008171
Aed10g1716 320 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 97 319 IPR002935 GO:0008171
Aed10g1716 320 PANTHER O-METHYLTRANSFERASE-RELATED 81 320 - -
Aed10g1716 320 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 81 320 - -
Aed10g1716 320 Gene3D Vaccinia Virus protein VP39 96 320 IPR029063 -
Aed10g1716 320 CDD AdoMet_MTases 160 259 - -
Aed10g1716 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 318 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1716 Aed-Chr10 21817511 21819150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1716 57 319 Monolignol Biosynthesis Gene Families AT4G34050 82.264 1.56e-164 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1716 K00588 - gmx:100779260 483.026