Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1708 ATGGTTTTACTAAAGCAACTAGCTTCACTTTCAACACTCCTCACTCTATTCCTTCTCCCCCTTCTCTTAGTAGATTCCCAACAAATCCTTCAAACTCCATCATCACCCACCCCATTAGTCCCCAACATTTTAAACTTCATAGACCAAAGGCTCGCACAAATCTTCCCAATAATCCAAACCTTCAAAAACACAATAACCTCAGACCCCCTCGGAGTAACATCAACATGGACCGGCCCCAACATATGCAACTACACCGGCTTCTACTGCGACAACCCGCCCGACAACCTCACCGCCACAACCGTCGCCTCCATCGACTTCAACGGCTTCAATCTCACCGCCCCGACGCTCGACGGCTTCATCGACCAACTCCCGGACTTGGCTCTCTTCCATGCAAACTCCAACAAATTCTCCGGCCCCATATCGCCTAAAATCGCGGCACTGAAGTCCCTCTACGAACTCGACCTGAGTAACAACCTGTTCTCAGGAACGTTCCCCACATCGGTCATAAACATCCCAACGTTATCCTTTCTGGATATTAGGTTTAACCTCTTCACCGGCGCAGTGCCGCCGCAGATTTTCATGCAAACGTTGGAATTGGACGTTCTTCTCCTCAACAACAACAACTTCATCCTGACGCTTCCCAACAACGTGGGAGACACCCAAGTTGTTTATCTAACGTTGGCCAACAACAAATTCACCGGTCCCATTCCACCTGGCATTGGAAAACCCTCGTCCACGTTGGTGGAAGTGTTACTATTGAACAACCTCTTAACCGGTTGTCTTCCCTACGAGATTGGTTTTCTGAAAAACCTCACATTGTTTGATGTTGGTGGGAATTTACTAACCGGTCCAATTCCATGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGTTGAACCTCGCTAGGAACTTTTTCTACGGACAGGTTCCGGAATCGGTTTGCGCGTTGGGAGATTTCAATCTGGCGAATCTTTCGTTGTCTTATAACTATTTCACCAAAGTGGGGCCCTTGTGCAAGAGTCTGATCCAGAGGGGTGTTCTTGATGTGAGGAAGAACTGTGTTTCGGGCCTTCCGGATCAGAGATCGGTGACGGAGTGCATGGCGTTCTTTTTGGTTCCGAGGTCTTGTTTGCGTCCTGCGTCGTTTAACCTCGTACCGTGTCAGACTCATCATATGACAAAACCACACGATAAGAAAACTACTAATAAGAGGCATTTGCTGTCGTATTCTGCTCTTTCAAGAAATAATAGAGTAGGTTTGTAA 1263 0.4766 MVLLKQLASLSTLLTLFLLPLLLVDSQQILQTPSSPTPLVPNILNFIDQRLAQIFPIIQTFKNTITSDPLGVTSTWTGPNICNYTGFYCDNPPDNLTATTVASIDFNGFNLTAPTLDGFIDQLPDLALFHANSNKFSGPISPKIAALKSLYELDLSNNLFSGTFPTSVINIPTLSFLDIRFNLFTGAVPPQIFMQTLELDVLLLNNNNFILTLPNNVGDTQVVYLTLANNKFTGPIPPGIGKPSSTLVEVLLLNNLLTGCLPYEIGFLKNLTLFDVGGNLLTGPIPWSFGCLKKVEQLNLARNFFYGQVPESVCALGDFNLANLSLSYNYFTKVGPLCKSLIQRGVLDVRKNCVSGLPDQRSVTECMAFFLVPRSCLRPASFNLVPCQTHHMTKPHDKKTTNKRHLLSYSALSRNNRVGL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1708 420 Gene3D Ribonuclease Inhibitor 57 217 IPR032675 -
Aed10g1708 420 SUPERFAMILY L domain-like 60 355 - -
Aed10g1708 420 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 416 - -
Aed10g1708 420 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 13 416 - -
Aed10g1708 420 Gene3D Ribonuclease Inhibitor 218 371 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1708 Aed-Chr10 21731372 21732634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1708 46 373 Leucine-rich Repeat extension Gene Families AT3G24480 45.427 5.77e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1708 - - gmx:100813314 636.721