LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g1707	ATGGGAAGAACAACCAAGTCCACTTTCTTTACCTTCTTGTTACTCTGTTCTTTCTTGCTCCACCTAGGAGTGGCACAAGAGGTAGCAAAATCCGAAAGCGAAGCGTTGGGGGAACCAGAAAGAAGAGAAACACTTGAGATTATCATAGGCGGCGGCGGCTCCCCTTCTCCTGCTCCTGCTCCTTATTACCAACCGTGCCCACCTCCCCCGCCGAAGCCGCTGAGCCGTTTGGACAAAGCGCGTCGAGTGCTTCTGAATTTCAAAAAACTCATCGGGGATGATCCAAACTGTTACACCCAAAACTGGAACGAGAACACCGACACGTGTGACTTCAAAGGGGTGCGATGCGCAAATTTTCCAGACGACAAGCAGCGAGCAGTTGCTGGACTCGACTTAAACGGAGCGAGACTCAACGGTAAAGGCGGTTGCCCGCTTCCCCTCCCGGGCATCGTCGACGGCATACCGGAGCTGACATTCTTCCACTCCAACTCTAACAACTTCTCCGGCAGCCTCCCGACCAACCTCACAAATATCAGATTCTTCTTCGAACTCGACCTCAGCAACAACAAGATCACCACCGGGTTCCCCCTGGAATCGATCCAGAACAACCAATTAGTATTCTTGGACCTCAGGTTCAACAAGCTGACAGGGTCGATCCCCTGGCAGCTCTTCCAGAGGGACCTGGACGTCATCTTCGTGAACAACAACCTCTTCACCGGCTGCCTTCCGGGGAACTTCGGCTCCACACCGGCTCGGTACCTCACCTTCGCGAACAACCGGCTCACCGGCTCCATCCCTAAGAGCCTCGGCTACGCGCCGAATCTCACGGAAGTCCTCCTTCTCGGGAACCAGTTCGACGGCTGCCTGCCCATCGAACTCGGGTACCTCAAGAAGGCGACCGTGTTTGACGCCAGCAAAAATCTCCTGACCGGTCCGATCCCCTACTCCCTCGGCTGCCTCAAGAGCATCCAGTTTCTCAACCTCGCCCACAACAAACTCTACGGCTGTGTCCCCGACAACCTTTGTCAAATCCCGAGCCTCCGCAACAACGGGAACCTCTCCTTGGCCGAGAATTACTTCACGGAAATCGGACCGTCTTGTTGGAGTTTGATCAAGTCCAAGGTTTTGGATATTTCTAGAAACTGCATTAAGGGACTGCCAAACCAAAGGTCACCACAGGAATGCTACGAGTTTTACAAAACAAAGATAACATGTCCGAACCCGAACTCCTACTACTACGTGCCGTGTAAATCGCACTGGGGGAAGCAAAGCAAACCCACTGGTCCTCCTTCTGAGCCCGTGACCTACAAGACTCTGAAACCACATCGCTTGAGATTGTGA	1341	0.5339	MGRTTKSTFFTFLLLCSFLLHLGVAQEVAKSESEALGEPERRETLEIIIGGGGSPSPAPAPYYQPCPPPPPKPLSRLDKARRVLLNFKKLIGDDPNCYTQNWNENTDTCDFKGVRCANFPDDKQRAVAGLDLNGARLNGKGGCPLPLPGIVDGIPELTFFHSNSNNFSGSLPTNLTNIRFFFELDLSNNKITTGFPLESIQNNQLVFLDLRFNKLTGSIPWQLFQRDLDVIFVNNNLFTGCLPGNFGSTPARYLTFANNRLTGSIPKSLGYAPNLTEVLLLGNQFDGCLPIELGYLKKATVFDASKNLLTGPIPYSLGCLKSIQFLNLAHNKLYGCVPDNLCQIPSLRNNGNLSLAENYFTEIGPSCWSLIKSKVLDISRNCIKGLPNQRSPQECYEFYKTKITCPNPNSYYYVPCKSHWGKQSKPTGPPSEPVTYKTLKPHRLRL	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g1707	446	Gene3D	Ribonuclease Inhibitor	250	405	IPR032675	-
	Aed10g1707	446	SUPERFAMILY	L domain-like	80	384	-	-
	Aed10g1707	446	Pfam	Leucine rich repeat N-terminal domain	79	116	IPR013210	-
	Aed10g1707	446	PANTHER	BNAC05G26270D PROTEIN	12	431	-	-
	Aed10g1707	446	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	12	431	-	-
	Aed10g1707	446	Gene3D	Ribonuclease Inhibitor	77	249	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed10g1707	Aed-Chr10	21725847	21728681	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed10g1707	76	398	Leucine-rich Repeat extension Gene Families	AT4G13340	41.975	1.43e-75	249

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g1707	-		-	gmx:100781948	668.692