Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1706 ATGAGGAAGCCTTGTTGTGATGTCAAAGACTTGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAGAAACTCATTGATTATATCAAGAAACATGGCGAAGTTTGTTGGCGTACACTCCCTCAGGCTGCAGGTTTACTTCGGTGTGGTAAAAGTTGTAGGCTGAGATGGATAAACTATCTACGCCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAGGATCTCATCATCAAGCTTCATGCGCTACTAGGAAATAGGTGGTCACTAATAGCTGGGAGATTGCCTGGACGAACAGATAATGAAGTGAAGAACTATTGGAATTCTCACATAAGAAGAAAGCTGATTAGCAAAGGAATTGACCCAAATAATCATCGATTCATGAACCATACAATCCCTTCATCCCTTGATATTCAGAAGAATCCACCAATCTCTGATGATAGTTCAAAACAACCCTTTGGTATCAAAGAGAAAAGCAGTAGTAAATCACCTCATGGTGTTTACAATAATAATAATAATTATGGTGAAGTGATCTCAGATGATGCTGCAGCAAGTGATGAGGTTGAGTCATCATGTGCAGCATTATTGCCGGATTTAAACCTTGATCTCTCTATGGCCATTAATAATCCTTCTTCACCTTCAACACTTCTTCTGTTTCAGTAA 663 0.3967 MRKPCCDVKDLNKGAWSKQEDQKLIDYIKKHGEVCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLISKGIDPNNHRFMNHTIPSSLDIQKNPPISDDSSKQPFGIKEKSSSKSPHGVYNNNNNYGEVISDDAAASDEVESSCAALLPDLNLDLSMAINNPSSPSTLLLFQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1706 220 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Aed10g1706 220 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Aed10g1706 220 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 211 - -
Aed10g1706 220 MobiDBLite consensus disorder prediction 133 169 - -
Aed10g1706 220 Gene3D - 5 65 - -
Aed10g1706 220 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Aed10g1706 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 60 IPR017930 -
Aed10g1706 220 CDD SANT 68 111 IPR001005 -
Aed10g1706 220 Gene3D - 67 133 - -
Aed10g1706 220 CDD SANT 15 60 IPR001005 -
Aed10g1706 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Aed10g1706 220 PANTHER MYB TRANSCRIPTION FACTOR 2 211 - -
Aed10g1706 220 SMART sant 65 113 IPR001005 -
Aed10g1706 220 SMART sant 12 62 IPR001005 -
Aed10g1706 220 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Aed10g1706 220 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1706 Aed-Chr10 21716981 21719913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1706 2 206 MYB Transcription Factor Family AT2G16720 56.098 1.79e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed10g1706 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1706 K09422 - gmx:100818783 323.553