Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1701 ATGGAAGCTCGTGGAGAAGGGTGTTGTGATAATTACTACAACGTTCTTGGTGTTAGTGAGCAATGCAACGTGGAAGAGATGAAACGCGCTTATAGGAAGCTTGCTATGCAATGGCATCCCGATAAGTGGACAAGGTCCACGCCTTCTTTGTTGGCTCAAGCCAAAAGCAAATTCCAGCAAATTCAACAAGCCTATTCAGGGAAAGCATTACGGTTTGGAAGAGTTGCAAGGCATGTTGATGGAAATGGCTAA 252 0.4484 MEARGEGCCDNYYNVLGVSEQCNVEEMKRAYRKLAMQWHPDKWTRSTPSLLAQAKSKFQQIQQAYSGKALRFGRVARHVDGNG 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1701 83 SUPERFAMILY Chaperone J-domain 10 66 IPR036869 -
Aed10g1701 83 PRINTS DnaJ domain signature 53 73 IPR001623 -
Aed10g1701 83 PRINTS DnaJ domain signature 13 31 IPR001623 -
Aed10g1701 83 PRINTS DnaJ domain signature 31 46 IPR001623 -
Aed10g1701 83 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Aed10g1701 83 Gene3D DnaJ domain 2 68 IPR036869 -
Aed10g1701 83 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 66 - -
Aed10g1701 83 Pfam DnaJ domain 11 66 IPR001623 -
Aed10g1701 83 SMART dnaj_3 10 81 IPR001623 -
Aed10g1701 83 CDD DnaJ 11 66 IPR001623 -
Aed10g1701 83 PANTHER PUTATIVE, EXPRESSED-RELATED 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1701 Aed-Chr10 21665527 21667860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1701 3 65 C2H2 Transcription Factor Family AT1G74250 38.095 2.56e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1701 - - gmx:100306079 100.523