Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1688 ATGATGCTGTTGTGTTCATTTTGTGTCACATGGCCATATTTGTGGTTTTGGGATTCCACCAACTTGCATCCAATTCTAACCATTCTTCTACTCACACTGATCAGTGTGCTATGTTTTCTAAGGTGGTTCAAGAATTCAACCAAAGAAGCAACTCTTCCATTTCCTTTGCCGCCTGGTCCAATAGGCTTGCCACTTCTAGGGTACCTTCCCTTTCTAGGAACCAATCCCCACCTCAAATTTCACAAGCTTGCACAACTTTATGGCCCTATCTACAAGCTCATGTTAGGAACCAAAACATTCATTGTGGTTAGTTCCCCCTCTCTTGTGAAAGAGATAGTGCGTGACCAAGACACCTTATTCGCCAACCGTGACCCTCCAATTTCAGCAATGGTGGCCTTGTATGGTTGCACTGACATAGCCTCTTTGCCTCACGGTCCACGGTGGAGGAAGGCTCGCAAGATATTGGTGCAAGAAATGCTCAGCAACACAAACCTCAGTAACTCTTTCTCTCATAGAAAGGTAGAGGTTAAGAAATCGGTTAAAGAGGTTTATGAGAAGAGAATAGGGTGCCTTATAAGCGTTAGTGAGTTGGCTTTTCTAACAGCTACAAATGCAATAATGAGCATGATTTGGGGTGAGACTTTGCAAGGAGAAAAAGGAGCTGCTATTGGAGCTGAGTTTAGAGTATTGGTGTCTGAACTTATGGTGTTACTAGGGAAGCCGAATGTTTCGGATCTTTACCCCTCTCTAGCATGGCTTGATTTGCAAGGAATTGAGAGAAGAACAAGAAAGGTCTCTCAATGGATTGATAGGCTCTTTGATTCTGCCATTGAAAAGCGAATGAATGTGACAGGGAATGGAGAAATTAAGTCAAAGAAGAAAGACTTCCTGCAATATCTGTTGGAGCTTACAAAGGGTGATAGTGATTCAGCATCAATGACTATGAACGAGATCAAGGCCATCCTCATAGATATAGTGGTGGGTGGAACAGAAACCACATCAACAACATTGGAATGGGTGGTAGCAAGGCTCCTGCAGCATCCTGGGGCAATGAAGAGAGTTCAAGAAGAGTTAAATGAGGTAGTAGGATTGGACAATTGTATTGAACTAGAATCCCAATTGTCCAAATTACAGTACTTAGAAGCTGTCATAAAGGAAACACTTCGTTTGCATCCACCTCTACCCTTTCTGATACCGCGTTGTCCGAGCCAAACTAGCACCATTGGTGGATTCACCATTCCAAAGGGTGCACAAGTAATGTTGAACGTGTGGACTATACACAGGGACACTGAAATTTGGGAAGATGCATTGGAATTTAGACCAGAGAGGTTTCTGATAAGTGATGATGCTGCAAAGTTGGACTATTGGGGGAGCAACAAATTTGAGTATCTTCCTTTTGGTTCTGGAAGAAGAATCTGTGCAGGGCTACCTCTTGCTGAGAAGATGTTTATGCTTGCTTCCTTTTTGCATTGTTTTGAGTGGAGATTGCCTAGTGGCACTGTACTTGAATTTTCAGGAAAATTTGGTGTTGTTGTCAAGAAAATGAAGCCACTAGTTGTTATTCCAAAGCCTAGACTGTCTAAACCAGAACTCTATACCAATGATGTTATGTAA 1614 0.4257 MMLLCSFCVTWPYLWFWDSTNLHPILTILLLTLISVLCFLRWFKNSTKEATLPFPLPPGPIGLPLLGYLPFLGTNPHLKFHKLAQLYGPIYKLMLGTKTFIVVSSPSLVKEIVRDQDTLFANRDPPISAMVALYGCTDIASLPHGPRWRKARKILVQEMLSNTNLSNSFSHRKVEVKKSVKEVYEKRIGCLISVSELAFLTATNAIMSMIWGETLQGEKGAAIGAEFRVLVSELMVLLGKPNVSDLYPSLAWLDLQGIERRTRKVSQWIDRLFDSAIEKRMNVTGNGEIKSKKKDFLQYLLELTKGDSDSASMTMNEIKAILIDIVVGGTETTSTTLEWVVARLLQHPGAMKRVQEELNEVVGLDNCIELESQLSKLQYLEAVIKETLRLHPPLPFLIPRCPSQTSTIGGFTIPKGAQVMLNVWTIHRDTEIWEDALEFRPERFLISDDAAKLDYWGSNKFEYLPFGSGRRICAGLPLAEKMFMLASFLHCFEWRLPSGTVLEFSGKFGVVVKKMKPLVVIPKPRLSKPELYTNDVM 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1688 537 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 Pfam Cytochrome P450 57 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 Gene3D Cytochrome P450 42 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 SUPERFAMILY Cytochrome P450 57 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Aed10g1688 537 PANTHER P450, PUTATIVE-RELATED 8 532 - -
Aed10g1688 537 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1688 537 PANTHER OS08G0547900 PROTEIN 8 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1688 Aed-Chr10 21561290 21564120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1688 16 532 Cytochrome P450 AT4G12300 45.594 3.18e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1688 - K20770 gmx:100785686 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1688 10 21561290 21564120 Aed6g1620 6 20132825 20135383 PCT