Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1687 ATGGCGTCAATCACCACCGTCACCCTTAAGACCCTTCTATTCCTCTGTTTCTGTTTCTGTTCCAATCATTTTCCACTGATCTCAACTTCTTCATCAGAACCAACCCATTCTTCATTCCCCAAACAAGCCCTCCCCAACAAACATGGTTACCTTCCAATCAGTCCCACTTCCACTTCATCCATCTTCTACGCTTTCTATGAAGCCAAAAACTCAACTTTACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATTGGCAACTTCTTCGAACTTGGACCCTGGCGTGTCACCGAATCACTCACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCTCAACAACACAAGAGATTCCGAAAGATCAAAACACTGTTGCAAAGCACCTCTTTGCTGCTATAACAAGGTTTGTTCAACTTGATCCTGTTTTTAAGCATCGCCCTATTTATATTACTGGTGAAAGCTATGCTGGCAAGTATGTTCCTGCAATTGGGTACTACATATTGAAGAAAAATGCGAACTTGCGAGTTTCTGAAAGAGTGAATTTGGCTGGTGTGGCTATTGGGGATGGTTTAACTGACCCCGAAACTCAAGTGGCTACTCACGCTTTGAACGCTTATTATGTTGGATTGATCAATGAGAGGCAGAAGAATGAGTTGGAGAAGGCTCAATTGGAAGCAGTTCGTTTGACACAAAGGAAGAATTGGAGTGAAGCAACGGAAACGAGATTCGAACTCTTGAACATGTTGCAAAACATGACAGGGTTGGCTACTTTGTATGACTACACAAAGAAAGCTCCTTATGAGGATGATTTGGTTGAAAAATTCTTGAACATTGCGGAGGTGAAGAAGGCCTTGGGGGTCAATGAATCGTTTGTGTATGAGATATGCAGTGATGTTGTTGGTGCTGCATTGCATGATGATTTGATGAAAAGTGTTAAGTATATGGTGGAATACTTGTTGAGTAGGACCAGGGTGTTGCTGTATCAAGGCCAGTATGATTTGAGGATTGGTGTGATGCAAGTAGAGGCTTGGGTGAAGACAGTGAAATGGGAAGGGATTGTGGAGTTTCTGAATGCAGAGAGGAAGATTTGGAAGGTCAATGGTGAGCTTGCTGGGTATGTTCAAAATTGGAAGTCTCTAACCAATGTTGTGGTTTTGGGAGCTGGGCATCTTTTGCCTGCTGATGAGCCTGTTAATTCTCAAGCAATGATTGAAGATTGGGTTTTGGAGAGGGGCGTGTTTGAAAATGTGCTGCAGGAAAATGTGTTAAGAGATTCTACATTTGTTGTGTAA 1371 0.4362 MASITTVTLKTLLFLCFCFCSNHFPLISTSSSEPTHSSFPKQALPNKHGYLPISPTSTSSIFYAFYEAKNSTLPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTESLTLQPNPGAWNRIFGLLFLDSPIGTGFSVASTTQEIPKDQNTVAKHLFAAITRFVQLDPVFKHRPIYITGESYAGKYVPAIGYYILKKNANLRVSERVNLAGVAIGDGLTDPETQVATHALNAYYVGLINERQKNELEKAQLEAVRLTQRKNWSEATETRFELLNMLQNMTGLATLYDYTKKAPYEDDLVEKFLNIAEVKKALGVNESFVYEICSDVVGAALHDDLMKSVKYMVEYLLSRTRVLLYQGQYDLRIGVMQVEAWVKTVKWEGIVEFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPADEPVNSQAMIEDWVLERGVFENVLQENVLRDSTFVV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1687 456 Coils Coil 238 258 - -
Aed10g1687 456 Pfam Serine carboxypeptidase 45 434 IPR001563 GO:0004185|GO:0006508
Aed10g1687 456 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Aed10g1687 456 Gene3D alpha/beta hydrolase 25 447 IPR029058 -
Aed10g1687 456 PANTHER CARBOXYPEPTIDASE 25 442 - -
Aed10g1687 456 SUPERFAMILY alpha/beta-Hydrolases 47 434 IPR029058 -
Aed10g1687 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 442 IPR001563 GO:0004185|GO:0006508
Aed10g1687 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Aed10g1687 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Aed10g1687 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Aed10g1687 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 406 419 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1687 Aed-Chr10 21551500 21552870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1687 297 434 Calmodulin-binding Proteins AT2G22960 21.583 3.45e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1687 K09645 - gmx:100780822 769.615