Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1686 ATGGCGTCAATCATATCCTCCTTCACCCTTCTTCTATTCCTCTGTTTTCTCTGTTCCAATCATTTCCCACTGATCTCAACTTCTTCATCAGAGCCAACCCATTATTCATTCCCCAAAGAAGCTCTCCCTAATAAACATGGTTACCTTCCAATCAGCCCCAATTCCACTTCTTCAATTTTCTACGCTTTCTACGAAGCAAAAAACTCAACTTTACCTCTCTCTCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCCGGCTGCTCCTCCATGATTGGAAACTTGTACGAACTTGGACCATGGCGTGTCACCGAATCACTCACCCTTCAACCCAACCCTGGTACTTGGAATAGAATCTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCTCAACAACACAAGAAATCCCAAAGGATCAAAACGGCGTCGCAAAACATCTTTTTGCTGCTATAACAAGCTTTCTTCAGCTTGACCCTGTTTTCAAGCACCGCCCTGTTTATATTACTGGTGAAAGCTACGCTGGCAAGTATGTTCCTGCAATTGGGTACTACATATTGGAGAAAAATGCAAACTTGCCAGTTTCTGAAGAAAAAGTGAATCTTGCTGGTGTGGCTATTGGGGATGGTTTAACCGACCCCGAAACTCAAGTGGCTACTCATGCTTTGAATGCTTATTATGTTGGGTTGATCAACGAGAGGCAGAGGAATGAGTTGGAGAAGGCTCAATTGGAAGCGGTTAAATTGACCCAAATAGGGAATTGGAGTGAAGCAACTGATGCCAGAAACAAAGTGTTGAACTTGTTGCAAAACAAGACAGGGTTGGCTACTTTGTATGACTACACAAGAAAAGCTCCTTATGAGGATGATTTGGTTGAAAAATTCTTGAACATTGCGGAGGTGAAGAAGGCCTTGGGGATCAATGAATCGTTTGTGTATGAGTTGTGTAGTGATGTTGTTGGGGCTGCGTTACATGTTGATGTGATGAAGAGTGTGAAATATATGGTGGAGTACCTTTTGAGGAGGAGCAAGGTGTTGTTGTATCAAGGTCAACATGACTTGAGGGATGGTGTGGTTCAAACAGATGTTTGGGTGAAGACAATGAAATGGAAAGGGATTGTGGAGTTTCTGAATGCTGAGAGGAAGATATGGAAGGTGAATGGAGAGGTTGCTGGGTATGTTCAAAATTGGAAGTCTCTCACTAATGTTGTGGTTTTGGGAGCTGGGCATCTTTTGCCTACTGATCAACCTGTTAATTCTCAAAAAATGATTGAAGATTGGGTTTTAGAAAGGGGTGTGTTTGAAGATGTGCATAAGGGAAATGTATCAAGAGAGTCTGTATTTGTTTTGTAA 1368 0.4276 MASIISSFTLLLFLCFLCSNHFPLISTSSSEPTHYSFPKEALPNKHGYLPISPNSTSSIFYAFYEAKNSTLPLSQTPLLIWLQGGPGCSSMIGNLYELGPWRVTESLTLQPNPGTWNRIFGLLFLDSPIGTGFSVASTTQEIPKDQNGVAKHLFAAITSFLQLDPVFKHRPVYITGESYAGKYVPAIGYYILEKNANLPVSEEKVNLAGVAIGDGLTDPETQVATHALNAYYVGLINERQRNELEKAQLEAVKLTQIGNWSEATDARNKVLNLLQNKTGLATLYDYTRKAPYEDDLVEKFLNIAEVKKALGINESFVYELCSDVVGAALHVDVMKSVKYMVEYLLRRSKVLLYQGQHDLRDGVVQTDVWVKTMKWKGIVEFLNAERKIWKVNGEVAGYVQNWKSLTNVVVLGAGHLLPTDQPVNSQKMIEDWVLERGVFEDVHKGNVSRESVFVL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1686 455 PANTHER CARBOXYPEPTIDASE 35 435 - -
Aed10g1686 455 Gene3D alpha/beta hydrolase 21 445 IPR029058 -
Aed10g1686 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 435 IPR001563 GO:0004185|GO:0006508
Aed10g1686 455 Pfam Serine carboxypeptidase 43 433 IPR001563 GO:0004185|GO:0006508
Aed10g1686 455 Coils Coil 237 257 - -
Aed10g1686 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Aed10g1686 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Aed10g1686 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Aed10g1686 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Aed10g1686 455 SUPERFAMILY alpha/beta-Hydrolases 45 433 IPR029058 -
Aed10g1686 455 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1686 Aed-Chr10 21549050 21550417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1686 296 433 Calmodulin-binding Proteins AT2G22960 20.863 1.55e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1686 K09645 - gmx:100780822 798.505