Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1684 ATGGAGTTCTTCATCAAAACACCAGTCTTCTTCTGTTTCTGCTTCTTTCTAAGCACTCTTTCGGTCTCAGCTTCTTCAAAATCAACCAATCTGTTCCCCAAAGAAGCTCTCCCTATAAAGCATGGTTACCTTCCAATCAGCCCCACTTCCACTTCTTCAATTTTCTATGCTTTCTATGAAGCTCAGAACTTAACTTCACCTCTCTCTCAAACCCCACTTCTCATTTGGCTCCAAGGTGGTCCTGGCTGCTCCTCAATGATTGGAAACTTGTATGAACTTGGCCCATGGCGAGTCACTGAATCACTCACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATCTTTGGTCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCTCAACAACACAAGAGATTCCAAAAGATCAAAACACTGTTGCAAAGCACCTCTTTGCTGCTATAACAAGGTTTGTTCAACTTGATCCTGTTTTTAAGCATCGCCCTATTTATATTACTGGTGAAAGCTATGCTGGCAAGTATGTTCCTGCAATTGGGTGCTACATATTGGAGAAAAATGCAAACTTGCCAGTTTCTGAAAGAGTGAATCTTGCTGGTGTGGCTATTGGGGATGGTTTAACCGACCCCGAAACTCAAGTGGTTACTCATGCTGTGAATGCTTATTATGTTGGATTGATCAACGAGAGGCAGAAAGATGAGTTGGAGAAGGTTCAATTGGAGGCAGTTAAATTAACCCAAATGGGGAATTGGATTGAAGCAAGGGATGCAAGAAACAAAGTGTTGAACTTGCTGCAAAACATGACAGGGTTGGCTACTTTGTATGACTATACAAAGAAAGCTCCTTATGAGGATGATTTAGTTGAAAAATTCTTGAACATTGCGGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCGTTTGTGTATGAGTTGTGTAGTGATGTTGTTGGTGCTGTGTTACATGCTGATGTGATGAAGAGTGTGAAATATATGGTGGAGTACCTTTTGAGTAGGAGCAAGGTGTTGTTGTATCAAGGTCAACATGATTTGAGGGATGGTGTGGTTCAAACAGATGTTTGGGTGAAGACAATGAAATGGGAAGGGATTGTGGAGTTTCTGAATGCTGAGAGGAAGATATGGAAAGTGAATGGAGAGATTGCTGGGTATGTTCAAAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGGGTGCTGGGCATCTTTTGCCTACTGATCAGCCTGTTAATTCTCAAAAAATGATAGAAGATTGGGTTTTGGAAAGAGGTTTGTTTAAAAGAATGTAG 1311 0.418 MEFFIKTPVFFCFCFFLSTLSVSASSKSTNLFPKEALPIKHGYLPISPTSTSSIFYAFYEAQNLTSPLSQTPLLIWLQGGPGCSSMIGNLYELGPWRVTESLTLQPNPGAWNRIFGLLFLDSPIGTGFSVASTTQEIPKDQNTVAKHLFAAITRFVQLDPVFKHRPIYITGESYAGKYVPAIGCYILEKNANLPVSERVNLAGVAIGDGLTDPETQVVTHAVNAYYVGLINERQKDELEKVQLEAVKLTQMGNWIEARDARNKVLNLLQNMTGLATLYDYTKKAPYEDDLVEKFLNIAEVKKALGVNESFVYELCSDVVGAVLHADVMKSVKYMVEYLLSRSKVLLYQGQHDLRDGVVQTDVWVKTMKWEGIVEFLNAERKIWKVNGEIAGYVQNWKSLTNVVVLGAGHLLPTDQPVNSQKMIEDWVLERGLFKRM 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1684 436 PANTHER CARBOXYPEPTIDASE 27 425 - -
Aed10g1684 436 Gene3D alpha/beta hydrolase 22 433 IPR029058 -
Aed10g1684 436 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Aed10g1684 436 SUPERFAMILY alpha/beta-Hydrolases 38 427 IPR029058 -
Aed10g1684 436 Coils Coil 231 251 - -
Aed10g1684 436 Pfam Serine carboxypeptidase 40 427 IPR001563 GO:0004185|GO:0006508
Aed10g1684 436 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 425 IPR001563 GO:0004185|GO:0006508
Aed10g1684 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Aed10g1684 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Aed10g1684 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Aed10g1684 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1684 Aed-Chr10 21539219 21540529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1684 290 427 Calmodulin-binding Proteins AT2G22960 20.863 8.89e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1684 K09645 - gmx:102663282 764.222