Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1683 ATGGAGTCAACGACCCACAAGTCCCCCATCATCAAAAACCATGTCTTCTTCTTCTGCTTCATTCTATGTCCTCTCTTAGTCTCAGCCTCAGCCTCAAAATCAACCCCTTCTTTCCCTAAAGAAGCTCTCCCTACAAAGCATGGTTACCTTCCAATCAGCCCCACTTCCACTTCTTCAATTTTCTATGCTTTCTATGAAGCTCAGAACTCAAATTCACCTCTCTCTCAAACCCCACTTCTCATTTGGCTCCAAGGTGGACCTGGCTGCTCCTCCATGATTGGAAACTTGTACGAACTTGGACCCTGGCGAGTCACCGAATCTCTCACCCTTCAATCCAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCACAACCCCAGAAGAGATCCCAAAAGATCAAAACACTGTTGCAAAGCACCTCTTGGCTGCTATAACAAGGTTTGTTCAACTTGATCCTGTTTTTAAGAATCGCCCTATTTATATTACTGGTGAAAGCTATGCTGGGAAGTATGTTCCTGCAATTGGGTACTACATATTGGAGAAAAATGCAAACTTGCCAGTTTCTGAAAGAGTAAATTTAGTTGGTGTGGCTATTGGGGATGGTTTAACCAACCCCGAAACTCAAGTGGTTACTCATGCCGTGAATGCTTATTATGTTGGACTCATCAACGAGAGGCAGAGGAATGAGTTGGAGAAAGCTCAATTGGAAGCAGTTAAATTAGCCCAAATGGGGAATTGGAGTGAAGCAACTGATGCCAGAAACAAAGTATTGAGAACGTTGCAAAACATGACAGGGTTGGCTACTTTGTATGACTACACAAGAAAAGCTCCTTATGAGGATGATTTGGTTGACCAATTCTTGAACACTGCTGAGGTGAAGAAGGCTTTAGGGGTGAATGAATCGTTTGTGTATGAGTCATGCAGTGATGCTGTTGGGGATGCACTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTGGAATACTTGTTGAGAAGGAGCAGGGTGTTGCTGTATCAAGGTCAGCATGATTTGAGGGATGGTGTGGTTCAAGCAGATGTTTGGGTGAAGACAGTGAAATGGGAAGGGATTGTGGAGTTTCTGAATGCTGAGAGGAAGATATGGAAGGTTAATGGAGAGCTTGCTGGGTATGTTCAAAAGTGGAAGTCTCTAACCAATGTTGTGGTTTTGGGGGCTGGACATCTTTTGCCTACTGACCAAGCTGTTAATTCTCAAAAAATGATAGAAGATTGGGTTTTGGAAAGGAGTTTGTTTAAAAGCGTGTAG 1329 0.4342 MESTTHKSPIIKNHVFFFCFILCPLLVSASASKSTPSFPKEALPTKHGYLPISPTSTSSIFYAFYEAQNSNSPLSQTPLLIWLQGGPGCSSMIGNLYELGPWRVTESLTLQSNPGAWNRIFGLLFLDSPIGTGFSVATTPEEIPKDQNTVAKHLLAAITRFVQLDPVFKNRPIYITGESYAGKYVPAIGYYILEKNANLPVSERVNLVGVAIGDGLTNPETQVVTHAVNAYYVGLINERQRNELEKAQLEAVKLAQMGNWSEATDARNKVLRTLQNMTGLATLYDYTRKAPYEDDLVDQFLNTAEVKKALGVNESFVYESCSDAVGDALHADVMKSVKYMVEYLLRRSRVLLYQGQHDLRDGVVQADVWVKTVKWEGIVEFLNAERKIWKVNGELAGYVQKWKSLTNVVVLGAGHLLPTDQAVNSQKMIEDWVLERSLFKSV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1683 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Aed10g1683 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Aed10g1683 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Aed10g1683 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Aed10g1683 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 436 IPR001563 GO:0004185|GO:0006508
Aed10g1683 442 PANTHER CARBOXYPEPTIDASE 25 436 - -
Aed10g1683 442 Coils Coil 237 257 - -
Aed10g1683 442 Pfam Serine carboxypeptidase 43 433 IPR001563 GO:0004185|GO:0006508
Aed10g1683 442 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Aed10g1683 442 Gene3D alpha/beta hydrolase 28 440 IPR029058 -
Aed10g1683 442 SUPERFAMILY alpha/beta-Hydrolases 44 433 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1683 Aed-Chr10 21536112 21537440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1683 296 433 Calmodulin-binding Proteins AT2G22960 20.567 5.36e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1683 K09645 - gmx:102663282 794.267