Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1681 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAGCAGCAGCCTTCGACTTCTTCTTCGTCTTCCTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACAGTTGGCATTGGTGGACCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATTGTGATGGAGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACCCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAATGATACATCAATCCCAGAGTTTGACTATCAGCAAAAGAGGCGTGTTGGCTATAAAGCAATAAAGAGCACTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCCTGCTTTCAAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAATAGCTTCGTCTCATCATTCAGAGAGGCAGTCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGGACATTCAGGTTCTGTTTTTCAAGGAGATGAAGCCCAAACAGATAATTTTATCGAAATGTACCTTAGACCTCCTTCAGCTAGTGAAGAGGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATTTGTCACTTGGTGACCAGAGGATTGTTGACAAGCATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGATTATTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAGCGTGCATCTACAACTGTGAATAATGGCAAGGTTTCAATGTCTTTTGAAACCATTGATGTTCTTGGTGAGACATTCATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACAGAAGCATTAAGAATGGGTATTAATGGACCTTGGATTACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTTAGTACACCACCACTTGTGTCTAATTCAACTGTGGCTGGTAGTCAAGAAACAGTGGTCGTTGCACCAAAGCCAATTCGTGTTACCCCTATCCTTGTTACCGGGCTTGAGGATTTACCTCAGCCGTGGACTCGATCCCCAACAAAATCTAAAATGGAACCAGTTGTGGCTGAATGGCATTTCGAATCTTCAGATTCTTCCCAGCTTGACAATGCAGTCCTAGCAACCACAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGATAGGGGTTTGCTTTTGGCAGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTGTCCCAGTCATAGTTGGAATCGGAGGTCCAAGCGGGTCTGGGAAGACTAGTATGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCACTAGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGATTTCAGTGCACTTGATTTATCCTTGCTATCAAAGAATATTGATGACATAAGAAATGGTCAAAGAACAAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGCTCAAAATTCGAAATGACTTTGACCCTGTGATTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCAGTGCAGAAATTTATTGATATTTATATAAGGCTTCCTGGGATCCCTTCTAATGGGCAGTTGAGAGATAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCATTGTTGATACGAGAGCCTATCAAAGAAGGGAACTTTATCATTCAACCTAAAGTGGATTTTGATATTAGCATTAGTACTGTTGCTGGTCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTGGAAGCAGCAGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAGAGTTATCTTGAAATAATTTTGGAAAGACTACCGGCAATAGAAAGAACTTCTGGTGGGATTCATTCTCAGCAATCAGCAAGGCTGCTAGAGATTCTTGAATTTATTCAATCTCAGGGATGCAACTCTGCTTCAGAATCCTCATCAAGTAGGGTAGTCTCTCCAATTGATGGGATCATTGAGGAGATGCAATCAAGGATCAGAAGGCTTGAAAGGTGGCTAGCGATAAATACGGTTCTATGGACATTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGGAAGCGTCAATAA 2658 0.3958 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYCDGVDEGNDVDSIDFDTLIKNLEDLTKGNDTSIPEFDYQQKRRVGYKAIKSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAVYKVKCRSESSDGHSGSVFQGDEAQTDNFIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKHFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNNGKVSMSFETIDVLGETFMVMRGTNRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNSTVAGSQETVVVAPKPIRVTPILVTGLEDLPQPWTRSPTKSKMEPVVAEWHFESSDSSQLDNAVLATTDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSMAHKMANIIGCEVVSLESYYKQVKDFKYDDFSALDLSLLSKNIDDIRNGQRTKVPIFDLESGARSGFKELEVSEDCGVLKIRNDFDPVISPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVEAAGSMLKLDGSYTTKSYLEIILERLPAIERTSGGIHSQQSARLLEILEFIQSQGCNSASESSSSRVVSPIDGIIEEMQSRIRRLERWLAINTVLWTFLMSALVGYSLYQRKRQ 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1681 885 SUPERFAMILY CYTH-like phosphatases 645 792 IPR033469 -
Aed10g1681 885 Gene3D - 637 797 - -
Aed10g1681 885 PANTHER URIDINE KINASE 479 614 - -
Aed10g1681 885 CDD UMPK_like 65 227 - -
Aed10g1681 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 177 IPR027417 -
Aed10g1681 885 PRINTS Uridine kinase signature 548 559 - -
Aed10g1681 885 PRINTS Uridine kinase signature 521 538 - -
Aed10g1681 885 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 479 614 - -
Aed10g1681 885 PANTHER URIDINE KINASE 2 423 - -
Aed10g1681 885 PANTHER URIDINE KINASE 629 876 - -
Aed10g1681 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 601 IPR027417 -
Aed10g1681 885 Gene3D - 518 623 IPR027417 -
Aed10g1681 885 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 423 - -
Aed10g1681 885 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 629 876 - -
Aed10g1681 885 SMART AAA_5 62 212 IPR003593 -
Aed10g1681 885 SMART AAA_5 520 721 IPR003593 -
Aed10g1681 885 Gene3D - 64 243 IPR027417 -
Aed10g1681 885 Pfam Phosphoribulokinase / Uridine kinase family 107 224 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1681 Aed-Chr10 21511680 21527269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1681 65 224 PRT Gene Family AT1G55810 21.788 1.48e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1681 - - rcu:8258197 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1681 10 21511680 21527269 Aed6g1670 6 20485591 20495021 PCT