Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1678 ATGAGGAAACCAAAGCTATTTTGGGTCTCAGCTGCAGCTCCTCTTCTCTCTGTCATCATCTCTACCATCGTGGCTTTCGCAATCAAAGCTGAAAATCATGGTATCAGTATTGGAAACTTGCAACGGGGACTAAATCCTCCTTCAGTGGATAAGCTACTCTTTGAAGGAAGTCACTTCGGTCTAGCAATCAAAACTGGCCTTGTCGTTGGCATTTTATCCCTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCAACTATGAGAAACTACAAAGTGGATGGAAACAAAGAAATGATCGCAATCGGGTTCATGAACATGGTTGGCTCCACCACATCCTGCTATGTTACAACAGGATCTTTCTCTCGCTCGGCTATCAATCATAATGCAGGTAGTAAAACAGCAATGTCAAACGTAGTAATGTCTGTGACAGTCTTGGTGACACTGCTGTTTCTTATGCCACTGTTTCAATACACACCGAATGTTATATTGGGTGCTATCATAATAACAGCAGTGATTGGCCTCATTGATATCCCGGGTGCTTATCTCATTTGGAAGCTAGACAAATACGATTTCTTTGTGATGTTGATTTCATTCTTTGGTGTGATTTTTGTCTCTGTCCAGGTCGGCCTTCTCATTGCAGAAGCTACAAGAGAACCTGGTTTTCTTATTTTAAGTATAGAGGCTCCCATCAACTTTGCAAACATCACATATCTCAACGAGAGAATATTAAGATGGGTAGAAGAGGAAGAAGCTTTCATAGAGGAAAACTTGAGCCTTCAATTTGTGATTCTGGACATGTCAGCTGTGAGTGGCATAGACACAAGTGGAGTATCACTTTTCAAGGACTTGAAAAATACATTGACAATGAAGGGTCTTGTGTTGGTGAATCCTCTAGCCGACGTCATCGAAAAGCTGCGCAGGGCGGATGAAGCCAATGATTTCGTTCGAGATGATTACCTTTTCCTGACAGTTGGAGAGGCTGTAACTTCACTTTCACAAGCAATGAAGGGCCAATCACCGGCAATGGAAGAAGAGGAGCCACATACAATTGTGACTGAGTGCTAG 1065 0.4263 MRKPKLFWVSAAAPLLSVIISTIVAFAIKAENHGISIGNLQRGLNPPSVDKLLFEGSHFGLAIKTGLVVGILSLTEGIAVGRTFATMRNYKVDGNKEMIAIGFMNMVGSTTSCYVTTGSFSRSAINHNAGSKTAMSNVVMSVTVLVTLLFLMPLFQYTPNVILGAIIITAVIGLIDIPGAYLIWKLDKYDFFVMLISFFGVIFVSVQVGLLIAEATREPGFLILSIEAPINFANITYLNERILRWVEEEEAFIEENLSLQFVILDMSAVSGIDTSGVSLFKDLKNTLTMKGLVLVNPLADVIEKLRRADEANDFVRDDYLFLTVGEAVTSLSQAMKGQSPAMEEEEPHTIVTEC 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1678 354 PANTHER SULFATE TRANSPORTER 214 336 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed10g1678 354 PANTHER SULFATE TRANSPORTER 1 213 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed10g1678 354 SUPERFAMILY SpoIIaa-like 217 332 IPR036513 -
Aed10g1678 354 Pfam STAS domain 214 327 IPR002645 -
Aed10g1678 354 PANTHER SULFATE TRANSPORTER 3.3-RELATED 214 336 IPR030313 -
Aed10g1678 354 Gene3D STAS domain 211 337 IPR036513 -
Aed10g1678 354 MobiDBLite consensus disorder prediction 335 354 - -
Aed10g1678 354 ProSiteProfiles STAS domain profile. 211 331 IPR002645 -
Aed10g1678 354 PANTHER SULFATE TRANSPORTER 3.3-RELATED 1 213 IPR030313 -
Aed10g1678 354 CDD STAS_SulP_like_sulfate_transporter 214 323 - -
Aed10g1678 354 Pfam Sulfate permease family 4 196 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1678 Aed-Chr10 21489627 21493280 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1678 1 339 Inorganic Solute Cotransporters AT1G23090 62.895 8.15e-158 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1678 K17471 - gmx:100779433 537.724