Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1675 ATGGCAAAGCGCTTGATTCCGAGCTTCAACCGCGTTCTCGTGGAGAAAATTACTCCTCCCTCAAAGACAAGCGGCGGCATTCTCCTCCCTGAGAAATCCTCCCAGCTTAATTCGGGAAAGGTGATCGCGGTTGGACCCGGATCACGTGACAAGGCGGGGAACTTGATTCCGGTGGCCGTCAAGGAAGGGGATCACGTGCTCTTGCCGGAGTACGGTGGCTCGCAAGTCAAGCTCGATGACAAAGAGTATGATTCGGGATTGTGTTCCATTTGTTTAGGGACGAAGACATCTTGGGAATTCTGCATGATTGATGCTGCTGTTGCTGCGTTTGTGAAATTGTGA 342 0.5175 MAKRLIPSFNRVLVEKITPPSKTSGGILLPEKSSQLNSGKVIAVGPGSRDKAGNLIPVAVKEGDHVLLPEYGGSQVKLDDKEYDSGLCSICLGTKTSWEFCMIDAAVAAFVKL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1675 113 Pfam Chaperonin 10 Kd subunit 6 83 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 Gene3D GroES chaperonin 1 88 IPR037124 GO:0006457
Aed10g1675 113 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 85 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 SMART Cpn10_2 4 91 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 CDD cpn10 4 83 IPR020818 GO:0005524|GO:0006457|GO:0140662
Aed10g1675 113 PANTHER GROES-LIKE FAMILY PROTEIN 1 85 - -
Aed10g1675 113 SUPERFAMILY GroES-like 4 83 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1675 Aed-Chr10 21455631 21458294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1675 7 83 Calmodulin-binding Proteins AT5G20720 37.179 3.14e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1675 K04078 - gmx:100527505 153.68