Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1666 ATGGAGAACCTTCTGGGTCTCATCAAACTTCGTATCAAAAGAGGCACTGATCTCAGAGCTTGCGATACTCGCACCAGTGACCCATATGTCTTTGTCACCATGGCTGAACAGAAACTGAAAACTGGTGTTGTGAAAGATACTTGTAATCCTGAGTGGAATGAAGAATTGACACTTTATGTAAGTGGCGATGTTAACGTTCCCATACATCTGACAGTTTCAGACAAAGACACTTTCACCGGAGATGACAACCTGGGCGACGCAGAAATAGACCTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAGTGATCTACCGGATGGCCATGTAGTCAAGACGGTTCAACCAGATAGGACTAACTGCCTTGCTGAAGAGAGCAGCTGCATATGGAGAAATGGAAAAATCATCCAAGAGATGAGTTTAAGATTGAGAAATGTTAAGACTGGGGAAATAACTGTGGAAATTGAGTGGGTTGATCTTCCAGATTCAAAGGGCTTATCAGAAGTTGAGTTTTAG 516 0.4283 MENLLGLIKLRIKRGTDLRACDTRTSDPYVFVTMAEQKLKTGVVKDTCNPEWNEELTLYVSGDVNVPIHLTVSDKDTFTGDDNLGDAEIDLKPYLQCVKMELSDLPDGHVVKTVQPDRTNCLAEESSCIWRNGKIIQEMSLRLRNVKTGEITVEIEWVDLPDSKGLSEVEF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1666 171 SMART C2_3c 7 103 IPR000008 -
Aed10g1666 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Aed10g1666 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 171 IPR044562 -
Aed10g1666 171 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 171 - -
Aed10g1666 171 Gene3D C2 domain 5 165 IPR035892 -
Aed10g1666 171 Pfam C2 domain 7 93 IPR000008 -
Aed10g1666 171 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1666 Aed-Chr10 21383525 21385989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1666 38 167 C2H2 Transcription Factor Family AT1G70790 58.333 3.59e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1666 - - gmx:100781585 314.309