Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1633 TCCCCAAACACAAAACAACAATTTCTCACAATTCAGGAACTCTTGTTCGTCACTGTGGTTGAAACTGAAGAGAAACTCAATTCAACTCAATTCAATTCAATGTCAGAGAAGATGCAGCAACAAGGGGAGCAAATCGTTGACGTTGGATCGGTGGTGGAAGCCGTTTCTGCTGACGACGGTGACGCCGCTCCTCTCTACACCCTCGAAAGTCTCTGCATGCGTTGCGGTGAAAACGGGATTACAAGATTTTTATTTACTTCTATTCCTAACTTCAGAAAGATTTTGTTGTCAGCTTTCGAATGTCCACACTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACTGCGTGGTTGTTGCTACTCTCTGGAGATCCCATCAGGCGAACAGAAGCACCTTACGTTGCTCTATGCAATTGAAGCCACTGCAACTGACATGATGCTAAATCGACAAGTGGTAAAAGCAGAATCTGCTACCATTACGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCGACGGTGGAAGGGATACTAATGAGAGCAGCTGATGAACTTCAGGCCCTTCAAGAGGAACGCAAAAAGCTGGCTCCAGAGACAGCTGAGGCAATTGATCAGTTCTTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCAGCCTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCACTGACTATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCCACTCAGATTAAAGGAACTCATGATGAAGAACCAGAAGGGGGAGAAGCTGTGACTGCTGATCCAGTGAGGAGAGAACCTCATGGGACAATAGGAGCAACAGCTGGTCATCGAGCCATTGCACAGAGTAACAGTGCAGAAATGGCTGAAGCCTTATTTCGATATACTGCGCCAGAAGAGGTGATGACTTTCCCATCTTCTTGTGGGGCCTGTGCCACTAACTGTGAGACTCGAATGTTTGTCACCAATATTCCTTATTTCCAAGAAGTAATTGTTATGGCATCCACATGTGATGGTTGTGGTTACCGCAACTCTGAGGTATATACTGATTTCTTGAGTATAGTTCTCTCTTTTGAGGGCTGGAATAAATATCTCTTCGCCTTGCAGTTGAAACCTGGTGGGCGAATTCCTGAAAAAGGAAAAACAATTACTCTATGTGTGAAGAATATTAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCTGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTGTTGATGAACAGAGAAAAAGCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTCGATGATGCATTAGGCAATTCTTTTGTAGCACCTGCAACCGATGATCTGAAAGAGGACAATCAATTAGCATTGATGTGTTTTCAACTTTCTATACTTGATCATGACTATGGATCAGTTGAGGAATACGAGAGGTCATGGGAACAAAATGAAGAATTTGGTCTGAATGATATGGACACCTCTTCTGCCGATGCCGCTTATGAATCAACAAATACTACTAAAGCTGAGTGA 1767 0.4324 SPNTKQQFLTIQELLFVTVVETEEKLNSTQFNSMSEKMQQQGEQIVDVGSVVEAVSADDGDAAPLYTLESLCMRCGENGITRFLFTSIPNFRKILLSAFECPHCGERNNEVQFAGEIQLRGCCYSLEIPSGEQKHLTLLYAIEATATDMMLNRQVVKAESATITIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKLAPETAEAIDQFLVKLRACATGESAFTFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSTQIKGTHDEEPEGGEAVTADPVRREPHGTIGATAGHRAIAQSNSAEMAEALFRYTAPEEVMTFPSSCGACATNCETRMFVTNIPYFQEVIVMASTCDGCGYRNSEVYTDFLSIVLSFEGWNKYLFALQLKPGGRIPEKGKTITLCVKNINDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSVDEQRKSKWIDFKARLNKLLSLEEAWTLILDDALGNSFVAPATDDLKEDNQLALMCFQLSILDHDYGSVEEYERSWEQNEEFGLNDMDTSSADAAYESTNTTKAE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1633 588 Gene3D ZPR1, A/B domain 410 567 IPR042451 -
Aed10g1633 588 Gene3D ZPR1, A/B domain 117 272 IPR042451 -
Aed10g1633 588 PANTHER ZINC FINGER PROTEIN ZPR1 404 581 IPR040141 -
Aed10g1633 588 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 72 269 IPR004457 GO:0008270
Aed10g1633 588 Gene3D ZPR1, zinc finger domain 62 115 IPR042452 -
Aed10g1633 588 Gene3D ZPR1, zinc finger domain 331 384 IPR042452 -
Aed10g1633 588 PANTHER ZINC FINGER PROTEIN ZPR1 42 382 IPR040141 -
Aed10g1633 588 MobiDBLite consensus disorder prediction 565 588 - -
Aed10g1633 588 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 404 581 - -
Aed10g1633 588 SMART zpr1 70 245 IPR004457 GO:0008270
Aed10g1633 588 SMART zpr1 341 524 IPR004457 GO:0008270
Aed10g1633 588 Pfam ZPR1 zinc-finger domain 70 244 IPR004457 GO:0008270
Aed10g1633 588 Pfam ZPR1 zinc-finger domain 405 522 IPR004457 GO:0008270
Aed10g1633 588 Pfam ZPR1 zinc-finger domain 341 382 IPR004457 GO:0008270
Aed10g1633 588 Coils Coil 181 201 - -
Aed10g1633 588 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 42 382 - -
Aed10g1633 588 MobiDBLite consensus disorder prediction 563 588 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1633 38 586 C2H2 Transcription Factor Family AT5G22480 67.213 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1633 K06874 - gmx:100798741 876.7