Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1624 ATGGAAAGAGGCGCTTACAGAGGCCGTGGCCGTAACGCTTACGGTGGTGGCCGTGACGGTAATGGCGGCGGCGGCGGCGGTTACGGTGGCCGTGACGGCGGTCGTAACAGTTACGGTGGAGGTCGTGGCGGTCGTGGCGGTGGCGGACGTAACGGTAACGGTGACAGAAGAGAGTTTAATCAACATCCACAATCTGATAGTGCCAGCGTTAGTGTTAGAGAATTTCCTTCTCAACAACCACCGTCACAGTGGCAACCGAAGACAAACCCTCCATCTTTCTCTGCTGCATTTCAAAACCCTAATCATTCACTTTCACATCCTCAAACTCATAAGCAAACTGTTCCAGATATTGGATCTTTGAAGATATCAGAGAAGAGAGCAACGGAGAGTAGCATCACACCTCTGCGAAGACCTGACAATGGCGGAACAGCGGCGGTTCGAAAATGCGATCTCCGAGTGAACCATTTCCCGGTTTCGTTCAACCCGCAGAGCATAATCATGCACTACAACGTGGACGTGAAGCTCAAGGCTCCTCCACCGAAGAACAACAACCGTCCTCCGAAGAAGATTTCCAAGTACGACCTCTCGCTGATTCGGGAGAAGCTCTTCTCCGACAACTCGCTCCCAGTGTCGGCCTACGACGGCGAGAAGAACATCATCAGCGCGGTGCCGCTGCCGGAGGGGACGTTCTCCGTGGACGTGTCGAAAGGCGAGGACGAGAGGACGGTTTCGTATTTGGTCACACTCACATTGGTGAACAGGCTTGAGCTTCGGAAGCTGAAGGACTATCTCAGTGGAAACGTGCTTTCGATTCCGAGAGATGTTCTGCACGCCTTGGATTTGGTGGTGAAGGAGAATCCTGCTAAGCAGTGTGTTTCGATGGGGCGGTGCTTCTTCCCTCTGGATCCTCCATTGAGGGAGAAGGATCTTAACCGCGGCATAGTTGCAATTGGAGGGTTTCAGCAGAGTCTTAAGAGCACTTCCCAGGGCTTGGCATTGTGCCTTGACTACTCGGTTTTGTCCTTCCGGAAGAAGATGTCAGTGTTGGATTACCTGCACGAGCATATCAGGGACTTCAATCTGAGGGAGTTTGGACGGTTCAGGAGACACGTCGAGAATGCACTTGTTGGATTGAAGGTTAATGTTACCCACCGGAGGACGAAGCAGAAGTACACTATCACTAAGTTGACACCCAAGGCTACGAGGAATATCTCGTTCACGATTTTGGACCCTGAGAACCGAAATCCCCCAAGGGAGGCTAGTCTGATTGCTTACTTTCTGGAGAAATATGGTGTGAACATTGAATACAAGGACATTCCTGCCTTGGATTTCGGAGGCAGCAAGACGAACTTCGTCCCTATGGAGTTGTGTGTCTTGGTCGAGGGGCAGAGGTTCCCCAAGGAGAATTTGGACAAGTATGCTGCCAAGGACTTGAAAGACATGTCAGTGGCTCCGCCGAGGGTGAGGCAAAGTACAATACAGGCAATGGTGGGCTCTAAGGAAGGACCATGCGGAGGTGGTGTCATTAAAAGTTTTGGAATGAGTGTCAACACTTCCATGACAAGTGTGACAGGACGTGTAATTCAGCCTCCAAAATTGAAGTTAGGTAATCCAAATGGTCAGACTATTAGTATGACACTGGAAGTAGACAAATGTCAATGGAATCTAGTGGGGAAATCAATGGTGGAAGGCAGGCCAGTTGAGTGTTGGGGCATTCTTGATTTTACCAGCCGGGAGTCTGGTTGGCAGAAATTAAAAGGCAAACAATTCGTTGAGAGGCTTATTGATAAGTACAGAAGATTAGGCATTGTCATGAAGGAGCCAGTTTGGTATGAACAATCGGATATGTGGAGTCTTGGGGATTACAATTCGCTGTGTAAATTACTTGAAAATATTGATGATAAGGTTCGAAAAAGATGTCGACGAAAGCTACAATTTCTTCTTTGTGTGATGGCTGACAGGCATCAAGGTTACAAGTGCCTCAAATGGATTGCTGAGACCAAGGTTGGCATGGTGACGCAATGCTGCTTGTCTGGTAATGCTAATGAAGGGAAGGACCAATATCTTACAAATCTTGCCCTCAAGATCAATGCCAAAATTGGAGGAAGTAATGTAGAGCTCATCAATAGGCTACCACACTTTGAGGGTGCAGGTCATGTGATGTTCATAGGGGCTGATGTCAATCATCCAGCTTCCCGGGACGTCAGCAGTCCATCAATTGCTGCTGTAGTTGGCACTGTTAATTGGCCTGCCGCAAACCGCTATGCAGCACGTGTTTGTTCTCAAGGTCATCGGGTTGAGAAAATTGTGAATTTTGGGAGAATTTGCTACGAACTCGTTTCACATTATGAAAGGCTGAACAAAGCCAGGCCTGAAAAAATTGTTATCTTTCGTGATGGCGTGAGCGAGAGTCAATTTCAAATGGTTCTCTCGGAGGAGTTACAAGATTTGAAATCGGCATTCCGTGACTCAAATTACTTCCCAACCATCACTCTTATTGTCGCACAAAAGCGACATCAAACTCGATTTTTCCCTGTGTCTCCAAAGGATGGGATTCAAAATGGCAATGTGTTTCCCGGTACAGTTGTGGACACAAAAGTGGTACACCCTTTTGAATTTGACTTTTACCTTTGTAGTCACTATGGAAGCTTGGGTACAAGCAAGCCCACTCATTATCATGTCTTATGGGATGAGCATAAATTCACCTCTGATGATTTGCAGAAACTCATATATGACATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTGGTCCCTCCAGTGTACTATGCTGATCTTACTGCATACAGAGGACGGTTATACTATGAAGCAATGAATCAAATGCAGTCTCCTGGTTCAGCAGTGTCTTCTTCGTCGTCGCAGATTACTTCTTCGTCACTTTCTTCAGCAAGCTCAAGTTTAAATGATCCTGGGTATTACAAGTTGCATGCTGATGTGGAAAACATAATGTTCTTCATCTGA 2988 0.4726 MERGAYRGRGRNAYGGGRDGNGGGGGGYGGRDGGRNSYGGGRGGRGGGGRNGNGDRREFNQHPQSDSASVSVREFPSQQPPSQWQPKTNPPSFSAAFQNPNHSLSHPQTHKQTVPDIGSLKISEKRATESSITPLRRPDNGGTAAVRKCDLRVNHFPVSFNPQSIIMHYNVDVKLKAPPPKNNNRPPKKISKYDLSLIREKLFSDNSLPVSAYDGEKNIISAVPLPEGTFSVDVSKGEDERTVSYLVTLTLVNRLELRKLKDYLSGNVLSIPRDVLHALDLVVKENPAKQCVSMGRCFFPLDPPLREKDLNRGIVAIGGFQQSLKSTSQGLALCLDYSVLSFRKKMSVLDYLHEHIRDFNLREFGRFRRHVENALVGLKVNVTHRRTKQKYTITKLTPKATRNISFTILDPENRNPPREASLIAYFLEKYGVNIEYKDIPALDFGGSKTNFVPMELCVLVEGQRFPKENLDKYAAKDLKDMSVAPPRVRQSTIQAMVGSKEGPCGGGVIKSFGMSVNTSMTSVTGRVIQPPKLKLGNPNGQTISMTLEVDKCQWNLVGKSMVEGRPVECWGILDFTSRESGWQKLKGKQFVERLIDKYRRLGIVMKEPVWYEQSDMWSLGDYNSLCKLLENIDDKVRKRCRRKLQFLLCVMADRHQGYKCLKWIAETKVGMVTQCCLSGNANEGKDQYLTNLALKINAKIGGSNVELINRLPHFEGAGHVMFIGADVNHPASRDVSSPSIAAVVGTVNWPAANRYAARVCSQGHRVEKIVNFGRICYELVSHYERLNKARPEKIVIFRDGVSESQFQMVLSEELQDLKSAFRDSNYFPTITLIVAQKRHQTRFFPVSPKDGIQNGNVFPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHKFTSDDLQKLIYDMCFTFARCTKPVSLVPPVYYADLTAYRGRLYYEAMNQMQSPGSAVSSSSSQITSSSLSSASSSLNDPGYYKLHADVENIMFFI 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1624 995 Pfam PAZ domain 362 471 IPR003100 GO:0005515
Aed10g1624 995 ProSiteProfiles PAZ domain profile. 346 461 IPR003100 GO:0005515
Aed10g1624 995 Gene3D - 717 995 IPR036397 GO:0003676
Aed10g1624 995 MobiDBLite consensus disorder prediction 1 143 - -
Aed10g1624 995 MobiDBLite consensus disorder prediction 63 116 - -
Aed10g1624 995 CDD PAZ_argonaute_like 346 460 - -
Aed10g1624 995 CDD Piwi_ago-like 508 944 IPR045246 -
Aed10g1624 995 SUPERFAMILY Ribonuclease H-like 630 946 IPR012337 -
Aed10g1624 995 SMART Piwi_a_2 646 945 IPR003165 GO:0003676
Aed10g1624 995 Pfam N-terminal domain of argonaute 147 282 IPR032474 -
Aed10g1624 995 SMART DUF1785_2 292 345 IPR014811 -
Aed10g1624 995 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 118 994 - -
Aed10g1624 995 Pfam Piwi domain 647 944 IPR003165 GO:0003676
Aed10g1624 995 ProSiteProfiles Piwi domain profile. 646 945 IPR003165 GO:0003676
Aed10g1624 995 SUPERFAMILY PAZ domain 342 498 IPR036085 GO:0005515
Aed10g1624 995 Gene3D paz domain 341 465 - -
Aed10g1624 995 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 118 994 - -
Aed10g1624 995 SMART PAZ_2_a_3 350 493 IPR003100 GO:0005515
Aed10g1624 995 Pfam Argonaute linker 1 domain 294 344 IPR014811 -
Aed10g1624 995 Gene3D - 527 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1624 Aed-Chr10 21061166 21065650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1624 148 994 Eukaryotic Initiation Factors Gene Family AT5G43810 33.184 1.51e-137 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1624 K11593 - gmx:100805250 1584.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1624 10 21061166 21065650 Aed7g1138 7 9011024 9013338 PCT