Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1618 ATGGAGTTAGAGGTGCAGGTCGTGGGGGGCATAGACTCTTGTTTCGTATCCCTCCCACGCTCTCTAATCCAAACTCTCCAATCCACGCGCTCCACACAGCTCCCTGAAATCCTCGCTCTCGAGCTTCGCTCTTCCACTCACACTTGGTTCGTCGCTTGGTCCGGCGCCACCTCCGCCTCTTCTTCCGCCATAGAGGCATGCACGCGCCGCCGCACTTTCAATCCCCGTTTCTCCTCAATTCGCCGAGTCAGGATTGTCCATGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCATACTGTCATCACATTCCAAGTGGCTTCTGTTTTTCCGAAGAACGTGGTGGTACAACTGATGCCAGGAACTGAAGTTGCTGTTGCTCCAAAAAGACGCAAAAAAAGTTCAGATTCAGCAGGAGATTCACATCTAGATTCCTCTAATAAAGAGTATACTGCTAAGATGCTGCTTCGTTTACAAGATCCAGATGGATTATGTAGTACCAGGACTCATGTCAAAGGAGTTGAGCTTCTTGTAGGGCTTACTTCTGTTGCTTTTGTTCACCCAGAGACAGCCAAAAAATACTCATTCAACATGCTTCAATTGGTTTCAATAGTACCCAGAGTATCCAAGGAGAATGTTAATATTCCCAGAACCAATATTATGAAAGCCAAAAGTGGTTCAGCTACTAATGAAGTTGAGAATGGATATACTGACAAGACAGAATATCGACAAGCAATTGTTCAATTGTTGATTTCAGAATCTGTGGCTGAAGGACATGTGATGGTAGCTAAGTCTCTTCGCCTTTATTTGAGAGCTAGCCTACATTCATGGGTTTATTTGAAAGCATGCAATATTATTTTGGAAAAAAGTATTCCTTCCACCTCTTTTTTTCCATGCCAATTCAAACTATTAAAGCAGGAGAATGCTGTTGAGAAAGATGGTCTAGAAGTTTTTCATGGCCACAATAATCACATCGATGAAAAATTGCATGCAAAAGCTTCATCAGGTGTCTTTGTGGATACTGTAGATTGGTCAATCCAAAATGACATTGTAGCAGCTCTCTCTGATGAATCAAATTACAAAGCAGAGGAAGAGGCTACAAATCAATCTCAGAATCAAAGGGGATTACAGAGTCTTGTACGACTATGGTATATCACACAACTTAAGGCAATTACTTCCATTTCGGGTATGGAGGTTAGTTCATTGATTATGGGTAGTAAAACCTTGCTTCATTTTGAAGTAAGCTGTTATAAGCTTGAGAATAATGGGAAGGTTCAGTTAGCCTATTCAGAGAACAGTGACAAGGCTACTGAAATGTTGTTTTTATTGACCTTTGGTGAAGAACATCTGCATCATGGGAAACTTAATGCATATGAAGTTGCTCTTGGTGGAAGACTCGATAACATCAATATTGGGGACCTGAAGCTTTTTGAAAGGATGAACTTGTGTGATCCGGTGTTTATTCATTCTATAGAAGAGAGAGCCTCCAAAGACCACATTAGTTCAAATGTATCTTCCCTTGGCTGGATGAACAAAACTGCAGATGATGTTATCAATAGGATGTTGATATTGTTATGTTCTGCATCTGGATTGTGGTTTGGCTCACACAACTTACCACTCCCTGGACATGTTCTGATATATGGACCTCCTGGCTCTGGGAAAACTATATTAGCAAGAACTGTGGCAAAATCCCTTGAGAATCGTGAGGACATCTTAGCACACATAATTTTTGTTTCCTGCTCAAAACTTGCCCTGGAGAAGGTCCCAGTTATTCGCCAAGAACTTGCAAACCATGTAACTGAAGCTTTAAACCATGCTCCTTCTGTTGTCATCCTTGATGATCTTGATAACATAATTTCTACCCCTGACTCTGAAGGTTCTCAGCCATCAATATCTATTGCTGGACTCACAGATTTTCTGGTTGATATCATTGATGAATATGGGGAGAAGAGGCAAAAATCATGTGGATTCGGACCAATAGCCTTCATAGCTTCCATACAATCCCTAGAGAAGATACCACAATCTTTGAGCTCTTCAGGACGGTTTGACTTTCACATAAAGCTGCCTGCTCCTGCAGCCTCTGAGCGCAGGGCTATGTTGAAGCATGAAATACAGAGGCGTCACTTGCAATGCAATGATGACATCCTGCTTGATGTGGCTGTAAAATGTGATGGTTATGATGGTTATGATCTGGAAATATTAGTTGACAGAACTGTCCATGCTGCCGTTCGCCGTTTTTTGCCATCTAATGCTTCTATTTATGAGCATGAGAGTCCTGCTTTACTAAGGGAGGATTTCTCTCAGGCAATGCTTGATTTTCTTCCAGTTGCAATGCGTGATATCACAAAATCAGCTTCTGATGATGGCCGTTCTGGATGGGATGATGTGGGTGGTCTTGTTGACATTCGAAATGCTATTAAGGAGATGATAGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCACAAGCACCTTTGAGGTTGCGGTCAAATGTCCTTTTATATGGTCCTCCTGGCTGTGGCAAAACTCACATAGTTGGTGCTGTTGCTGCTACTTCTTCACTTCGATTCATATCAGTGAAAGGGCCAGAGTTGTTAAACAAGTACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCTAAAGCAGCTGCTGCAGCACCATGCCTACTTTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGGCATGACAATACTGGAGTAACTGATCGTGTTGTTAATCAATTTCTGACTGAGTTAGATGGTGTTGAGATTTTAGCTGGTGTATTTGTGTTTGCTGCAACCAGCAGTAGACCAGATTTACTTGATGCAGCACTGTTGAGACCTGGTAGGTTGGATCGTCTTCTATTCTGTGACTTTCCGTCTTTGGATGAGAGATTCGAAATTCTTGCAGTACTTTCTAGAAAGGGTTTGTCTTGCAATTTACAAGGAGATGGGAACCTAATGAACCTGCCTAGAGGGACCAACTCTGCAGGTGCTGGGTGTGGTGGAAAACGAGGATCAAGGTTAGGGGATATTGGACGAAGAGAAATTACAATCCAAGATAGTGGCCACGGAGGGTCAAGCTCCATTGTGGCTATAGTGTTACCAATGGCCAATGATATTGATTTGGCTACAATAGCTAATATGACCGAGGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCACAGCTTGCAGCAGTTCATGATGTTCTGGAAAACGTGGATGCCTCTAGGCCAGAAAAAACACCAGTTATTACTGATGCTCTTCTGAAGTTCACAGCTTCCAAGGCTAGACCATCTGTTTCAGAAGAAGAGAAGAGAAGACTCTACAATATATATCACCAGTTCCTTGATTCAAAAAGATCTGTTGCCGCCCAGGTTTTTTCCCTCTCCCTCCCTCCTTTTCTCTCCCCCAATCTCTGTGTTTCTGTTGAGTTTTTATGTTGGGGAGTCAAGGGATACAAAAGGCAAGAGGGCAACTCTAGCTTGACAGTGAAGTAA 3519 0.4257 MELEVQVVGGIDSCFVSLPRSLIQTLQSTRSTQLPEILALELRSSTHTWFVAWSGATSASSSAIEACTRRRTFNPRFSSIRRVRIVHEGMRFPLWLHGHTVITFQVASVFPKNVVVQLMPGTEVAVAPKRRKKSSDSAGDSHLDSSNKEYTAKMLLRLQDPDGLCSTRTHVKGVELLVGLTSVAFVHPETAKKYSFNMLQLVSIVPRVSKENVNIPRTNIMKAKSGSATNEVENGYTDKTEYRQAIVQLLISESVAEGHVMVAKSLRLYLRASLHSWVYLKACNIILEKSIPSTSFFPCQFKLLKQENAVEKDGLEVFHGHNNHIDEKLHAKASSGVFVDTVDWSIQNDIVAALSDESNYKAEEEATNQSQNQRGLQSLVRLWYITQLKAITSISGMEVSSLIMGSKTLLHFEVSCYKLENNGKVQLAYSENSDKATEMLFLLTFGEEHLHHGKLNAYEVALGGRLDNINIGDLKLFERMNLCDPVFIHSIEERASKDHISSNVSSLGWMNKTADDVINRMLILLCSASGLWFGSHNLPLPGHVLIYGPPGSGKTILARTVAKSLENREDILAHIIFVSCSKLALEKVPVIRQELANHVTEALNHAPSVVILDDLDNIISTPDSEGSQPSISIAGLTDFLVDIIDEYGEKRQKSCGFGPIAFIASIQSLEKIPQSLSSSGRFDFHIKLPAPAASERRAMLKHEIQRRHLQCNDDILLDVAVKCDGYDGYDLEILVDRTVHAAVRRFLPSNASIYEHESPALLREDFSQAMLDFLPVAMRDITKSASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAVAATSSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILAGVFVFAATSSRPDLLDAALLRPGRLDRLLFCDFPSLDERFEILAVLSRKGLSCNLQGDGNLMNLPRGTNSAGAGCGGKRGSRLGDIGRREITIQDSGHGGSSSIVAIVLPMANDIDLATIANMTEGFSGADLQALLSDAQLAAVHDVLENVDASRPEKTPVITDALLKFTASKARPSVSEEEKRRLYNIYHQFLDSKRSVAAQVFSLSLPPFLSPNLCVSVEFLCWGVKGYKRQEGNSSLTVK 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1618 1172 Pfam ATPase family associated with various cellular activities (AAA) 831 959 IPR003959 GO:0005524|GO:0016887
Aed10g1618 1172 Pfam ATPase family associated with various cellular activities (AAA) 544 689 IPR003959 GO:0005524|GO:0016887
Aed10g1618 1172 Gene3D - 692 771 - -
Aed10g1618 1172 SUPERFAMILY Cdc48 domain 2-like 81 128 IPR029067 -
Aed10g1618 1172 Pfam AAA+ lid domain 1043 1081 IPR041569 -
Aed10g1618 1172 PANTHER - 3 66 - -
Aed10g1618 1172 PANTHER - 1039 1131 - -
Aed10g1618 1172 Gene3D - 792 962 IPR027417 -
Aed10g1618 1172 Pfam Peroxisome biogenesis factor 1, N-terminal 81 128 IPR015342 GO:0005524|GO:0005777|GO:0007031
Aed10g1618 1172 Gene3D - 1032 1123 - -
Aed10g1618 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 767 IPR027417 -
Aed10g1618 1172 PANTHER AAA-FAMILY ATPASE 1039 1131 - -
Aed10g1618 1172 SMART AAA_5 540 692 IPR003593 -
Aed10g1618 1172 SMART AAA_5 827 964 IPR003593 -
Aed10g1618 1172 PANTHER - 80 978 - -
Aed10g1618 1172 CDD AAA 797 961 - -
Aed10g1618 1172 Gene3D - 490 691 IPR027417 -
Aed10g1618 1172 SUPERFAMILY ADC-like 10 63 IPR009010 -
Aed10g1618 1172 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 548 567 - -
Aed10g1618 1172 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 1028 1046 - -
Aed10g1618 1172 PANTHER AAA-FAMILY ATPASE 80 978 - -
Aed10g1618 1172 PANTHER AAA-FAMILY ATPASE 3 66 - -
Aed10g1618 1172 CDD AAA 538 689 - -
Aed10g1618 1172 Gene3D - 963 987 - -
Aed10g1618 1172 Gene3D - 78 129 - -
Aed10g1618 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 793 1118 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1618 Aed-Chr10 20991865 21006787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1618 764 978 Calmodulin-binding Proteins AT3G56690 46.544 1.41e-51 196