Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1600 ATGTCATCGGAGAAGGAGAGAGAAACCCAAGTTTACTTGGCCAAGCTCTGTGAACAAGCCGAGAGATATGAAGAGATGGTTGAGTGCATGAAGACAATTGCAAAACTTGATCTAGAGCTGACTGTGGAAGAGAGGAACCTGCTCTCTGTAGGATACAAGAATGTGATTGGTGCAAGAAGAGCCTCATGGCGCATCATGTCATCAATTGAACAGAAGGAAGAGTCCAAAGGGAATGAGAGCAATGCAAAACTGATCAAGAGCTATCGCCACAAGGTAGAAGAGGAACTCTCCAAGATTTGCAGTGACATCCTCAACATTATTGATCAGCATCTTGTTCCTTCTTCCACCTCAGGAGAAGCCACTGTTTTCTACTATAAGATGAAAGGTGACTATTTTCGATACCTAGCAGAGTTCAAGACTGACCAAGATAGAAAGGAGGCAGCTGAGCAATCTCTGAAGGGATATGAGCAAGCATTCGATGAGGCAATTGCAGAGCTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAATCTCACTCTCTGGACCTCTGATTTACCTGAGGATGGAGGTGACGAGATCAAGACAGAAGAAGCCAAACCTGCTGAAGCTGCTGAGGTTTGTGTATGA 657 0.449 MSSEKERETQVYLAKLCEQAERYEEMVECMKTIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNAKLIKSYRHKVEEELSKICSDILNIIDQHLVPSSTSGEATVFYYKMKGDYFRYLAEFKTDQDRKEAAEQSLKGYEQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKTEEAKPAEAAEVCV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1600 218 ProSitePatterns 14-3-3 proteins signature 2. 174 193 IPR023409 -
Aed10g1600 218 Coils Coil 145 172 - -
Aed10g1600 218 SMART 1433_4 7 205 IPR023410 -
Aed10g1600 218 Pfam 14-3-3 protein 13 159 IPR023410 -
Aed10g1600 218 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Aed10g1600 218 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Aed10g1600 218 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Aed10g1600 218 MobiDBLite consensus disorder prediction 199 218 - -
Aed10g1600 218 Gene3D - 157 208 IPR036815 -
Aed10g1600 218 PANTHER BNAC03G57490D PROTEIN 157 207 - -
Aed10g1600 218 PANTHER BNAC03G57490D PROTEIN 3 158 - -
Aed10g1600 218 SUPERFAMILY 14-3-3 protein 6 194 IPR036815 -
Aed10g1600 218 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Aed10g1600 218 PIRSF 14-3-3 156 204 IPR000308 -
Aed10g1600 218 PIRSF 14-3-3 1 158 IPR000308 -
Aed10g1600 218 Gene3D - 1 156 IPR036815 -
Aed10g1600 218 PANTHER 14-3-3 PROTEIN 157 207 IPR000308 -
Aed10g1600 218 PANTHER 14-3-3 PROTEIN 3 158 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1600 Aed-Chr10 20866365 20869703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1600 3 215 14-3-3 family AT1G26480 69.847 5.27e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1600 - K06630 gmx:100798385 370.933