Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1580 ATGACACAACAGCAGATGCTATCACAGATAACATCTCAAGCTGTGCCATCTCACTTCAATGTGCAAATCCAATCTGAACATCCATTCACTATACCACCACCCTCAATGCCAGAATCTAGGGTGAGAGAAACAGAATCCCTTGATTATCCTCACTCAGAACAAAAACTGCACTCTTCTTCATTGAACATTGCTGATAAGCCTAACAATGATGGCTACAACTGGAGGAAGTATGGGCAGAAGCATGTGAAAGGCTGTGACTTCTCAAGAAGCTATTACAAATGCACACATCCAAAGTGTCCTGTGAAGAAAAAGCTTGAGCGTTCTCTTGAGGGTCATGTGACTGCAATTATCTACAAAGGAGAGCACAATCATCACCAACCTCCTAATCCCAACAACAAGATCATCACAAAAGACAACAACAACATCCTAATGACTTCAAATGAAAGTTCATCTGATAGGTTGAAAGAAGAGATCATGAGTTCTCACTTAGTGTACTCTAAGAGGGATCTTGAGTCAAATGAACACGGCTCAGGAACAAGTGACAGTGAGGAAGTTGTTGGTGATCATGAAACTACTGAAGCAGATGAGAAAAATGATGAGCCTGATACCAAGAGAAGGAGCTATTACAAATGCACAACCAAAGGTTGCAATGTTAGGAAGCACGTTGAGAGGGCCTCAACGGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACACAATCATGATGTGCCAGCAGCTAAGAGTAATAGCCACACACTTGCCAACAACAGTGCATCACAGCTAAAAAAAGCACAAAACATTGCTATATCCGAAGAGAAGCATAGTTTCAGCAGCAATGAGCAGCGACCTGTGGCAAGTCTAAGATTGAAGGAAGAGCAAATAACATAG 891 0.4164 MTQQQMLSQITSQAVPSHFNVQIQSEHPFTIPPPSMPESRVRETESLDYPHSEQKLHSSSLNIADKPNNDGYNWRKYGQKHVKGCDFSRSYYKCTHPKCPVKKKLERSLEGHVTAIIYKGEHNHHQPPNPNNKIITKDNNNILMTSNESSSDRLKEEIMSSHLVYSKRDLESNEHGSGTSDSEEVVGDHETTEADEKNDEPDTKRRSYYKCTTKGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKSNSHTLANNSASQLKKAQNIAISEEKHSFSSNEQRPVASLRLKEEQIT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1580 296 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 207 IPR044810 GO:0003700
Aed10g1580 296 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 206 295 IPR044810 GO:0003700
Aed10g1580 296 MobiDBLite consensus disorder prediction 240 296 - -
Aed10g1580 296 MobiDBLite consensus disorder prediction 26 64 - -
Aed10g1580 296 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 1 207 - -
Aed10g1580 296 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 206 295 - -
Aed10g1580 296 MobiDBLite consensus disorder prediction 168 205 - -
Aed10g1580 296 Pfam WRKY DNA -binding domain 69 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 Pfam WRKY DNA -binding domain 202 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 MobiDBLite consensus disorder prediction 247 285 - -
Aed10g1580 296 SMART WRKY_cls 68 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 SMART WRKY_cls 197 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 SUPERFAMILY WRKY DNA-binding domain 66 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 SUPERFAMILY WRKY DNA-binding domain 201 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 ProSiteProfiles WRKY domain profile. 63 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 Gene3D WRKY domain 56 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g1580 296 Gene3D WRKY domain 178 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1580 Aed-Chr10 20635215 20638111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1580 1 296 WRKY Transcription Factor Family AT2G03340 42.597 2.05e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g1580 WRKY 5.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1580 - - gmx:100802109 362.073