LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g1556	ATGGCTAGTGTCTTTTCTGCATGTTCAGGTTCTTCTGCTGTTCTATTCCACAGCAGAAACTCCTTCCCCTATGCACCAGCCAAAGGGTCTTCTTTCCTTCACCTCAAAAGGCCTCTTAATTGTGTAGCTTCTTTGGGAACTGAGGTAGCATCAGTGTCTGCAGCAGTTGACACATTCTGGCAGTGGCTCAAGGAAGAGGGTGTTGTCTCTGATAGCAAGACACCAGTGAGGCCTGGTGTGGTGCCAGAAGGCCTAGGGCTGGTTGCACTCAAGGACATTTCTAGGAATGAGGTTGTCTTGCAGGTCCCCAAGAGGCTCTGGATCAACCCTGATGCTGTTGCAGCTTCTGAGATAGGGAAAGTTTGCAGTGAGTTGAAGCCTTGGCTTGCTGTTGCACTGTTTCTCATTAGGGAGAGGTCAGAGGAGGAGCTCTCAGAGCTGCAAGGGACTCAACTTCTGAACACAACAAGAAGTGTGAAACAGTATGTGGAGAATGAATTTAGGAAACTGGAAGAAGAAATCATACTCCCTAACAAGAAGCTTTTCCCTTCTCCTATTACACTTGATGACTTCTTCTGGGCGTTTGGAATTCTAAGATCAAGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTGATTCCATTAGCTGACTTGATAAACCATAGTGCCAGAGTAACTACTGAAGATCATGCTTATGAAATTAAAGGAGCAGCAGAGTTGGCTCTGGACTACGGTTTCATTGAACCAAATGCAGAACGCAATGCATACACCTTGACACTGCAGATATCTGAGTCAGACCCCTTTTATGGTGACAAACTAGACATAGCTGAGTCCAATGGTTTTGGTGAGACAGCGTACTTTGACATCTGCTACAACCGGCCACTTCCACAAGGATTGCTTCCATATCTGAGACTGGTAGCTTTAGGAGGCACTGATGCTTTCCTACTGGAATCAATATTTAGAAACTCCATCTGGGGTCATCTTGAATTGCCTGTGAGCCGTGACAATGAGGAGCTGATATGCAGAGTGGTTAGAGAAACCTGCAAAACTGCCCTTACTGGTTATCATACAACCATTGAAGAGGATCAAAAGTTGAAAGAAACAAAGCTAGATTCAAGGCTAGCTATAGCAGTTGGAATTCGAGAAGGGGAGAAGCAGCTCCTGCAGCAAATTGATGAGACCTTCAAGGAGAAAGAATCAGAATTGGACCAGTTACAATATTATCAAGAAAGGAGACTCCAGGACCTTGGACTTTGTGGGGAAAATGGTGATATCCTTGGAGACCTTGGAAAATTCTTCTAG	1305	0.4506	MASVFSACSGSSAVLFHSRNSFPYAPAKGSSFLHLKRPLNCVASLGTEVASVSAAVDTFWQWLKEEGVVSDSKTPVRPGVVPEGLGLVALKDISRNEVVLQVPKRLWINPDAVAASEIGKVCSELKPWLAVALFLIRERSEEELSELQGTQLLNTTRSVKQYVENEFRKLEEEIILPNKKLFPSPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEIKGAAELALDYGFIEPNAERNAYTLTLQISESDPFYGDKLDIAESNGFGETAYFDICYNRPLPQGLLPYLRLVALGGTDAFLLESIFRNSIWGHLELPVSRDNEELICRVVRETCKTALTGYHTTIEEDQKLKETKLDSRLAIAVGIREGEKQLLQQIDETFKEKESELDQLQYYQERRLQDLGLCGENGDILGDLGKFF	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g1556	434	Gene3D	-	249	413	IPR036464	-
	Aed10g1556	434	Pfam	SET domain	84	224	IPR001214	GO:0005515
	Aed10g1556	434	Gene3D	set domain protein methyltransferase, domain 1	141	248	-	-
	Aed10g1556	434	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	236	425	-	-
	Aed10g1556	434	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	48	238	-	-
	Aed10g1556	434	PANTHER	[FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC	236	425	-	-
	Aed10g1556	434	PANTHER	[FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC	48	238	-	-
	Aed10g1556	434	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	256	427	IPR036464	-
	Aed10g1556	434	Pfam	Rubisco LSMT substrate-binding	265	389	IPR015353	-
	Aed10g1556	434	Gene3D	set domain protein methyltransferase, domain 1	51	140	-	-
	Aed10g1556	434	SUPERFAMILY	SET domain	55	252	IPR046341	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SET	Aed10g1556		SET	9e-05	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g1556	K00592		-	gmx:100801721	731.865