Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1535 ATGGATCTGCTGCAAAATGTGCGAAACCACCAAAGCATGCGTTTGGTTCTCTCCACTGACTCCAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGGTTCACTGAGGCTATTATTCAACTCGGAGGTGCAGAAAGGCTCACTTTGTACCACCTCAAGAGCCATTTACAGGTACAAAAACATTTGCAGCTTAGAATTGAATCTCAAGGGAAGTACTTGCAATCAGTACTAACAAAGGCGCATGAAGCACTTGCAAGATACAACAACTCTTCAACAACTGGTATAGAACATGCAAAAGCTGAACTTTCTCAGTTAGTGTCAATAATCAACAATGCATCATCATGTCCAAGTCCAAGCTCTCCCCCCATTTCAGAACTGACAGAGACAACAACAAGAGGGCTAAGTAGTAGCAGTTTGAACTGTGGAGAGAGGAAACAACACAGAGGAACCATGTTGTGTTCACTTGAAAGCTCTTTGACATCATCTGAAAGCTCTTGGAAAACAACAGAAGAGAAGAACCCTCAAAAGTTCAATGGTGTTTCAGTTGAATTGCCTTTGATGGAGTTTCATCCACAAGATAAATCATTGATCAAGGGAAAGAGAAGTGCTGCAGCAGCAGCAGCAACTGATTCTGATTGTGTTGATCAACCTTGTGGAAAAAGATGTGGCAACAACAAGTTGAGGAATTCTGAAGTGTCAGAAATTATGCTTGACTTGAACAGCCAATACCACAGAGACAACATTGACTCATCATCATCAAGTGTGAAAGAAATAGATTTAAATTTCAGTTCAAGTTTTTAG 804 0.4129 MDLLQNVRNHQSMRLVLSTDSKPRLKWTPELHQRFTEAIIQLGGAERLTLYHLKSHLQVQKHLQLRIESQGKYLQSVLTKAHEALARYNNSSTTGIEHAKAELSQLVSIINNASSCPSPSSPPISELTETTTRGLSSSSLNCGERKQHRGTMLCSLESSLTSSESSWKTTEEKNPQKFNGVSVELPLMEFHPQDKSLIKGKRSAAAAAATDSDCVDQPCGKRCGNNKLRNSEVSEIMLDLNSQYHRDNIDSSSSSVKEIDLNFSSSF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1535 267 Pfam MYB-CC type transfactor, LHEQLE motif 52 83 IPR025756 -
Aed10g1535 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 53 267 IPR044848 GO:0003700
Aed10g1535 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 58 IPR044848 GO:0003700
Aed10g1535 267 Gene3D - 21 65 - -
Aed10g1535 267 MobiDBLite consensus disorder prediction 117 143 - -
Aed10g1535 267 SUPERFAMILY Homeodomain-like 21 59 IPR009057 -
Aed10g1535 267 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 53 267 - -
Aed10g1535 267 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 6 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1535 Aed-Chr10 20182157 20184267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1535 7 58 G2-like Transcription Factor Family AT1G69580 53.731 2.35e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1535 - - gmx:100776601 203.371