Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1534 ATGACCATGTTTGATCTCTACCCTTCCTTTGTCTTACTCCTTCTCTTCCTACTACCACACACAACTCACTCTGATGAAAACATTGCCATTTACTGGGGTTCAAACGATGGTGAAGGCACCTTAGCAGAAACATGTGCAACTGGCATATACTCCTTTGTAAACATAGCATTCCTTGCTCATTTTGGAAATGGCCAAACCCCTCAAGTGATCCTTGGAAGCCACTGTGACCCTTCTTCTGGAGGGAACTGCTCCTTACTTGGAAGGGACATCAGAAACTGCCAAAAGCAAGGAATCAAAGTGATGCTATCCATTGGAGGCCCAAGCATGAGTTACTCTCTTGCTTCCTCTAAGGATGCCAAGAATGTTTCTGATTACTTATGGCACAATTTCTTAGGTGGTGATGGTAAAGGTAATAATTATAACTCATCTTCATTTCCTCTAGGAGATGATGTAGTGTTGGATGGCATAGATTTTGGACTAGGAGGGTCCCTTATGACACAACATTGGGAAGAACTTGCACATTATATTAAGTCACATAAAAAAAATGTGTACTTAAGTGCAGCACCTCAATGCATTTTCCCTGATAGTGCACTTGGAAAAGCCCTTGAGACCGGACTTTTCGACTATGTTTGGATTCAATTCTACAACAATCCACTCTGCCAGTACAGTGAAGGCAATGCTTCCAAGCTTCTCGATGCATGGAAGCAATGGACAACATCGTTGAAATCGGGGAAGATATTCGTGGGGCTGCCAGCATCTCCAACAGCGTCTATAGGCGGGTATGTTCCACCTGATTTGTTGATCTCTCAGATCCTTAGTGTGGTGAAATTGTCTTCAAACTATGGAGGGATCATGCTTTGGTCAAGGCTTTTTGATAAAGAGAGTGGATATAGTACAAAGATTTTGGAAAACAGTGTTTGCTTAGAGAAAGGTGAAACTGAATGTGGAAGGCGTAAGAATGGTTTCGTTGAACGTTTCGGCTACATGGCCATGGATGGTTTTGTTGCTTCTGAGAGCAAGAGCATTGGCTTGCAGTGTTGTGAGGTTGTGTGTAGGAACAATTGTTCCTGTGAGGCTTATGCTCCTCTTAATTTTGTTAACAGTACTGGATGCCAGTTGTGGGGTAAAGGAACTAAGTTTATTAAGGATTCTGGTGGAAATTTCAAACGAGTTTACTTCGTCAAACATAAAGTGAACAAGCTGTGGGAATGGATTGGCATTGGTGTTGGAGCAGGTATTTCAGCACTTGTGTTCTGCTACTTGTTCTATTTATTGATGAGAAATGGTTACATGTCTCCAGAATATGCAATCAACGGTGTTGTCTCAGTCAAAACAGATGTATACAGCTTTGGTGTGCTGTTACTTGAGATTATTAGTGGGATGAAGAACAATAAAGTAGAAAGATGCATTCAGATTGGACTCTTGTGTGTGCAAGATCATGCAGTGGAAAGACCAACCATAGAAGAAGTTGTTACTTTTCTATCAAATGATGCCATCCAACTTGGCCAGCCAAAGCAGCCAGCATTCTTCATGTATGTGGTTGCTGGAGAGTCAGGGTGTCCTAATAGCAGCAGCAATCAAGAAAATTATTCACTAAATCATTTATCAATCTCCACTGCTTATGGCAGATAA 1632 0.4167 MTMFDLYPSFVLLLLFLLPHTTHSDENIAIYWGSNDGEGTLAETCATGIYSFVNIAFLAHFGNGQTPQVILGSHCDPSSGGNCSLLGRDIRNCQKQGIKVMLSIGGPSMSYSLASSKDAKNVSDYLWHNFLGGDGKGNNYNSSSFPLGDDVVLDGIDFGLGGSLMTQHWEELAHYIKSHKKNVYLSAAPQCIFPDSALGKALETGLFDYVWIQFYNNPLCQYSEGNASKLLDAWKQWTTSLKSGKIFVGLPASPTASIGGYVPPDLLISQILSVVKLSSNYGGIMLWSRLFDKESGYSTKILENSVCLEKGETECGRRKNGFVERFGYMAMDGFVASESKSIGLQCCEVVCRNNCSCEAYAPLNFVNSTGCQLWGKGTKFIKDSGGNFKRVYFVKHKVNKLWEWIGIGVGAGISALVFCYLFYLLMRNGYMSPEYAINGVVSVKTDVYSFGVLLLEIISGMKNNKVERCIQIGLLCVQDHAVERPTIEEVVTFLSNDAIQLGQPKQPAFFMYVVAGESGCPNSSSNQENYSLNHLSISTAYGR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1534 543 PANTHER ENDOCHITINASE 11 303 - -
Aed10g1534 543 PANTHER ACIDIC ENDOCHITINASE 11 303 - -
Aed10g1534 543 Gene3D Transferase(Phosphotransferase) domain 1 423 505 - -
Aed10g1534 543 Pfam Protein tyrosine and serine/threonine kinase 429 460 IPR001245 GO:0004672|GO:0006468
Aed10g1534 543 CDD GH18_hevamine_XipI_class_III 27 301 IPR045321 -
Aed10g1534 543 Pfam Glycosyl hydrolases family 18 28 288 IPR001223 GO:0005975
Aed10g1534 543 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 308 IPR001223 GO:0005975
Aed10g1534 543 SMART ntp_6 323 396 IPR003609 -
Aed10g1534 543 Gene3D Glycosidases 23 312 - -
Aed10g1534 543 ProSiteProfiles PAN/Apple domain profile. 315 397 IPR003609 -
Aed10g1534 543 SUPERFAMILY Protein kinase-like (PK-like) 427 505 IPR011009 -
Aed10g1534 543 Pfam PAN-like domain 335 376 IPR003609 -
Aed10g1534 543 SUPERFAMILY (Trans)glycosidases 24 300 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1534 Aed-Chr10 20174857 20179402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1534 1 302 Glycoside Hydrolase AT5G24090 51.613 2.28e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed10g1534 Glyco_hydro_18 2.5e-18 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1534 K01183 - gmx:100809337 751.125