Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1527 ATGAATTTCAAGAAAAGTTTTGAAAGAGTGTTACCAATCCTCTTCATATTAAAATGTATATTGCTCGACATATGCAACATAAACAAAGTTGAACTACTTGCTACAACTTTCGAAGAGATGGAGAATCTAAGGATGCTTCACTTCTATAAGTCTTCTCAGTACTTCCGGTGGAGTGAGTCAAATGTATTTCTTCCATCATCTCTTGAAAGTCTACCGGACGGTTTAAAATTTCTTCATTGGGATGACTTTCCTCAAAGAAATTTACCACCGAACTTTTGCCCAGAAAATCTAGTGACACTCGAAATGCCATGTTGCCATCTTGAACATCTTTGGGAACCAAACCAGCATTTACCGAATTTGAAGAGGCTGGACCTGAGTCATTCTCGGAAACTAAGTCTAATACCAGACCTCTGTCTGTCGCCAAATATTGAAGAAATAATTTTGAGTGATTGCGTCAGATTGGTTCAAGTTTACTCCTCAAAATTACTCAGCAAGCTCAATTCTTTATGTTTAGATGGTTGTGTTGAGCTTCGGAGTTTAACTGTTCCTAGCAATATTCTATCGACATCATCAGGATTAATTCTCCTTTCCAATTGTCGCAAGCTTGAAACGTTTTCAATCAGTTTATGTCAAATATTATTAGTCTATAATATGCATCCCCCAGCATTACTTGCCAACACAATTAACTTGGCACATCATCGTGATCGTCGTGGTAATCGTTTACCTGTACGTCTTTGTCTTGCTTTCCAATTAGGAGAGAATAAGGAGGAAGAAGACGCAGAAGCCACAATAAGTGCGTGGATAGAAGGTGCGTCATCTAGATCACCAAGTCTGAATAAACTTTGTTGGTTAGATCTCTCTAATTGTGAATCCCTTACAAGTCTTCTTCCATTTGAGTTTGACATTTCTGTGTTAAAAACACTAAAAAGACTTGATCTCAGAGGTTGCTCAAAATTCAAACATTTCCCTGAAATTATGAGCAGAATGGAAAACCTAGTGGTGCTTATCTTAAATCAAACAGCAATACAGGAACTACCTTCATCTCTATGCCAATTGGTGGGGCTTGAAGAATTGAGTTTGTGCAGGTGCTCGAGTCTTGAGATTATTCCATCTTCCATTGGAACTCTCAGCAAACTCTGCAAGTTGGACTTGACCTGCTGTGAATCACTTCAAACTTTTCCCAGCAGCATTTTCAAATTGAAGCTAACTAAACTTGATTTGTATGATTGCTCAATGCTGAGGACCTTCCCAGAGATCTTGGAGCCTGCAGAAAGTTTTGCTCATGTGAACTTAACGAAAACCGCTATTAAAGAACTACCTTCATCATTTGACAATCTGGTTGGGCTTCGGACCCTGCGTTTGAACATGTGCACTGATCTCGAGTCACTTCCGAACAGCATTGTCAATTTAAACCTTCTCGAGGAGCTTGACTGTTCGGGGTGTCTCAAACTATCAGAAATCCCAAGTGACATTGGTAGCTTGTCATTATTAAGGGATCTGTCACTCCATGAAAGTGGAATTGTGAACCTTCCAGAGAGCATTGCTCATCTTTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAGGCTTGAATGCATCCCACAGCTTCCACCATTTCTAAAACAGTTGCTGGCATTTGATTGCCCATCCATTAAAAGAGTGATGCCAATTTCAAATATTCAAATCCCATCAAATTCCAAAGAAGCTGCTACCTTCAAATTTCACTTCACCAACAGTCAACAGCTAGATCCATGTGCCCGAGATGAAATTGTGAATGATGCATGGCATAGGATCACCCAGGATGATGCATATAGGTCTGTGCACTTTAGTTTTCCAGGGAGTGTGATTCCTCATTGGTTTCCTAATCGTGGGATGGGATATTCAGTAACTATCAATATGGATTCTCTAAATTTGCGCAATGATAATAGACTCATTGGTTTTGCTTTGTGTGTAATTTTTGGACTCATAGATATGGATAATACTGAAGGTAGTAGATATGGTTCTTTTAGTTACAGATTAAAATATAAATATAATGGTCGCAGATACTCTCTTCCTGATCATGATGAGCTAAGAAACCATTTCTATTGGAAGGGTCAAAGGAGAACTGTTGATCAAGATCACACACTCCTGTGGAAATATAACTTGGAACCCGCAAGCATTAGACTTATGCTCTGTAATGCTCGCAGCTTCACTTTTCAGATGATCCATTATGATTATGGCTATGGGGAGTTTAAAAATTTCAAACCAAATATCATAGTAAAAGAATGTGGAGTATGCCCTCTTTATACCAAAGAAAAAGATAATAACAATGCTGATGCTGTTTGGATGTCTGAAGTACTCAGTTGTCATGGCATTCAATGGTGGGCATTTCAAATTCAACCTGGATTTGGTGGATACAATTCGGTCGTGGCATTTTCTACATTCTTCGGGCCTGATTCTCTTGCTTGCTCTGCATTGCATGTTGATTGCAAGTCTAAATTCAAAGATGTTTACTGTTATTCTACTCAACAACAACACAAATCAACTTACATGAATGACAGTAGTATAATACTATAA 2559 0.3853 MNFKKSFERVLPILFILKCILLDICNINKVELLATTFEEMENLRMLHFYKSSQYFRWSESNVFLPSSLESLPDGLKFLHWDDFPQRNLPPNFCPENLVTLEMPCCHLEHLWEPNQHLPNLKRLDLSHSRKLSLIPDLCLSPNIEEIILSDCVRLVQVYSSKLLSKLNSLCLDGCVELRSLTVPSNILSTSSGLILLSNCRKLETFSISLCQILLVYNMHPPALLANTINLAHHRDRRGNRLPVRLCLAFQLGENKEEEDAEATISAWIEGASSRSPSLNKLCWLDLSNCESLTSLLPFEFDISVLKTLKRLDLRGCSKFKHFPEIMSRMENLVVLILNQTAIQELPSSLCQLVGLEELSLCRCSSLEIIPSSIGTLSKLCKLDLTCCESLQTFPSSIFKLKLTKLDLYDCSMLRTFPEILEPAESFAHVNLTKTAIKELPSSFDNLVGLRTLRLNMCTDLESLPNSIVNLNLLEELDCSGCLKLSEIPSDIGSLSLLRDLSLHESGIVNLPESIAHLSSLKSLDLSDCKRLECIPQLPPFLKQLLAFDCPSIKRVMPISNIQIPSNSKEAATFKFHFTNSQQLDPCARDEIVNDAWHRITQDDAYRSVHFSFPGSVIPHWFPNRGMGYSVTINMDSLNLRNDNRLIGFALCVIFGLIDMDNTEGSRYGSFSYRLKYKYNGRRYSLPDHDELRNHFYWKGQRRTVDQDHTLLWKYNLEPASIRLMLCNARSFTFQMIHYDYGYGEFKNFKPNIIVKECGVCPLYTKEKDNNNADAVWMSEVLSCHGIQWWAFQIQPGFGGYNSVVAFSTFFGPDSLACSALHVDCKSKFKDVYCYSTQQQHKSTYMNDSSIIL 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1527 852 PANTHER LEUCINE-RICH REPEAT-CONTAINING 369 467 - -
Aed10g1527 852 PANTHER LEUCINE-RICH REPEAT-CONTAINING 277 376 - -
Aed10g1527 852 Gene3D Ribonuclease Inhibitor 249 401 IPR032675 -
Aed10g1527 852 PANTHER TMV RESISTANCE PROTEIN N-LIKE 369 467 - -
Aed10g1527 852 PANTHER TMV RESISTANCE PROTEIN N-LIKE 277 376 - -
Aed10g1527 852 Pfam C-JID domain 612 766 IPR045344 -
Aed10g1527 852 SUPERFAMILY L domain-like 272 552 - -
Aed10g1527 852 PANTHER LEUCINE-RICH REPEAT-CONTAINING 429 536 - -
Aed10g1527 852 Gene3D Ribonuclease Inhibitor 6 234 IPR032675 -
Aed10g1527 852 PANTHER TMV RESISTANCE PROTEIN N-LIKE 429 536 - -
Aed10g1527 852 SUPERFAMILY L domain-like 22 214 - -
Aed10g1527 852 Gene3D Ribonuclease Inhibitor 402 568 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1527 Aed-Chr10 20133811 20144063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1527 375 548 WRKY Transcription Factor Family AT4G12020 31.818 4.64e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1527 - - ccaj:109803335 860.136