Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1526 ATGCCCTACGCAGTTTCACAAGGAGGGTGGTTGAGTTTCATTCTCCTAATCATCTTTGCAATGATATGTTGTTACACAGCGCTGCTTCTACAAAGGTGCATGATCAAGCACCCGATAATCAAATCGTATCCTGACGTAGGCGCAGTTGCTTTCGGGCATGGAGGAAGAGCTCTCATAACCGCATTCATATGCGTAGGGCTGTTTCTAATCGCCGTCGAGCTTCTGATACTCGAAGGTGACAACATGGAGAAGTTGTTTCCACACATGAAGTTCAAGATTGGTGGCATTAGAATTGAAGGTAGGAAGGGTTTTGTGGTGCTGGCAGCTTTGGTCATACTGCCAACGACGTGGCTGAGAAGCTTGGGAGCTTTGGCCTATGTTTCTCTTGGTGGCGTATTGGCTTCTGTTGTTTTGATCGGTTGTGTTGCGTGGGTGGGTCAAGTTGATGGTGTTGGGTTTCATCAAAGAGGTAAAATTGTGAATTGGGATGGGTTGCCTACTTCCGCGAGCCTCTTCGCGTTCTGTTACTGTGCTCATTCGGTGATGCCAACACTCTGCAATTCTATGAAAAATAGAAGCCAATTTAGCAAGTGCGTGGACGTGCACGTCGCGATAGTGTCGAACCCGTGGCGGCCAGCATGCAGGGTGGCCAACAAGGTGTCTTGGACAGATGTTGGTGGTGGTGGACTGGTTTTGGTGGTTTGTTTTGTTGCAAGCACTATTACCTACGGATCAATCGCTGTTTTAGGCTACAAAATGTTTGGAGATGATTCGATGTCTCAAATAACCTTAAATCTACCTTCTAAGAAAATAAGTACCAAAATAGCAATTTTGACCACAGTGATCAATCCTTTCACTAAGTATGCTGTTCTAATCACCCCAATTGCAAATGCTATCGAAGACAAATGGCTTATCTGCAAGAGAAAACCTATTTTCATCCTCATTAGAACAACCATCGTGTTCACCTCTGTGCTTATGGCACTATTCATGCCATTTTTTGGCTACATTATGGCGTTTATTGGTTCAACTTTTAGTGTGGCAATGTCATTTTTGTTCCCTTGCTTGTGTTACCTAAAAATAAACAAAGCTGCTAGGAAATTTGGGTTGGAGTTGATCATCATTTCTACAATTCTTCTCATTGACGACAAGATGTTGTTCATGAAAATTTAG 1170 0.4359 MPYAVSQGGWLSFILLIIFAMICCYTALLLQRCMIKHPIIKSYPDVGAVAFGHGGRALITAFICVGLFLIAVELLILEGDNMEKLFPHMKFKIGGIRIEGRKGFVVLAALVILPTTWLRSLGALAYVSLGGVLASVVLIGCVAWVGQVDGVGFHQRGKIVNWDGLPTSASLFAFCYCAHSVMPTLCNSMKNRSQFSKCVDVHVAIVSNPWRPACRVANKVSWTDVGGGGLVLVVCFVASTITYGSIAVLGYKMFGDDSMSQITLNLPSKKISTKIAILTTVINPFTKYAVLITPIANAIEDKWLICKRKPIFILIRTTIVFTSVLMALFMPFFGYIMAFIGSTFSVAMSFLFPCLCYLKINKAARKFGLELIIISTILLIDDKMLFMKI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1526 389 Pfam Transmembrane amino acid transporter protein 1 204 IPR013057 -
Aed10g1526 389 Pfam Transmembrane amino acid transporter protein 231 366 IPR013057 -
Aed10g1526 389 PANTHER OS06G0228500 PROTEIN 1 203 - -
Aed10g1526 389 PANTHER OS06G0228500 PROTEIN 231 380 - -
Aed10g1526 389 PANTHER OS05G0424000 PROTEIN-RELATED 1 203 - -
Aed10g1526 389 PANTHER OS05G0424000 PROTEIN-RELATED 231 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1526 Aed-Chr10 20129832 20132714 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1526 1 374 Amino Acid or Auxin Permease AAAP Family AT3G28960 43.767 2.34e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1526 K15015 - gmx:100812006 527.709